Results for 3pmgb-1-AS


3pmgb-1-AS    : VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIV : MRSA_HAEIN
MRSA_HAEIN    : .........MANRKYFGTDGVRGKVGAYPITPDFALKLGWAAGKVLASQ..GSKMVLIGKDTRISGYMLESALEAGLAAAGLSAAFTG...PMPTPAIAYLTRTFRAEAGIVISASHNPYY...DNGIKFFSAKGTKLPDEIEEAIEAMLEQP..MDCVESALGKASRINDAAGR....YIEFCKGTF : PGMU_HUMAN
PGMU_HUMAN    : VKIVTVKTQAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQFDLENKFKPFTVEIV : PGM2_YEAST
PGM2_YEAST    : FQIETVPTKPYEDQKPGTSGLRKKTKVFKDEPNYTENFIQSIMEAIPEG.SKGATLVVGGDGRYYNDVILHKIAAIGAANGIKKLVIGQHGLLSTPAASHIMREEKCTGGIILTASHNPGGPENDMGIKYNLSNGGPAPESVTNAIWEISKKLTSYKIIKDFELDLGTIGKNKK.....YGPLLVDII : PARF_PARTE
PARF_PARTE    : LWRIEAPTQPYAGQKPGTSGLRKKVSEATQP.NYLENFVQSIFNTLRKDELKN.VLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIRVGNCIGGIILTASHNPGGEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTVDNLQIGVYKFEGTRLE....KSHFEVKVV : S77135
S77135        : LPLPSTMLSLPRSPLFGTDGIRGKAGELLTAP.LALSLGFWAGQVLREQTDTAGPVIIGQDSRLSSDMLANAMAAGLNSAGVEVWQLG...LCPTPCVAYLTRKTAAIGGIMISASHNPPE...DNGIKFFDHQGLKLPKSLATAIEAGLRGQNQTSGLNASWGRSYGQPHRVQY....YQDFLLGSL : PSU856431
PSU856431     : .........MTSRKYFGTDGIRGRVGQFPITPEFMLKLGWAAGMAFRKM..GACRILVGKDTRISGYMFESALEAGLSAAGADVLLLG...PMPTPAIAYLTRTFHAEAGIVISASHNPHY...DNGIKFFSGQGTKLPDEIEMMIEELLDAP..MTVAESELGKVSRINDAAGR....YIEFCKSSV : PGMU_ECOLI
PGMU_ECOLI    : NVAQLTALKPEAGVKFGTSGHRGSAARHSFNEPHILAIAQAIAEERAKNGITG.PCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILGGPLADGIVITPSHNPPE...DGGIKYNPPNGGPADTNVTKVVEDRANALLADGLKGRILDEAMASGHVKEQLVQPFVEGLADIV : DDU61984
DDU61984      : FKVNIIPTQPFEGQKPGTSGLRKKVTEVMKT.NYLGNFVQSIFNALPEDKLKGSTIVVGGDGRYYNNDAIQLIFQIAAANGVGKILVGRYGLLSTPAISAIVRARSALGAIILTASHNPGGPNGDFGIKYNMSNGGPAPESITNAIYKHTTSITQIKTTRNVVDNLGLLKTYEWN....DGEFVIEVI : PGMU_AGRTU
PGMU_AGRTU    : .MIKTIKTTPYQDQKPGTSGLRKKVPVFAQE.NYAENFIQSIFDALEGF..EGQTLVIGGDGRYYNREVIQKAIKMAAAAGFGKVLVGQGGILSTPAASNVIRKYKAFGGIVLSASHNPGGPTEDFGIKYNIGNGGPAPEKITDAIYARSKVIDSYKIS.DADIDLDKIGSFKV......DELTVDVI : CELR05F91
CELR05F91     : IAVVETPTKPFAGQKPGTSGLRKRVPEFQQQ.NYTENFVQAILDAGLGSKKKGSQLVVGGDGRFLSMEATNVIIKIAAANGLSRLIVGQNGFLSTPALSNLIRR.VVDGGIILTASHNPGGPKGDFGIKFNCENGGPAPDQVTDAIYQITTKIDKYLIA.ECFTQVGRYEYDIEG....VGHFVVDVI : MCU84888
MCU84888      : FKVSRVETKPYDGQKPGTSGLRKKVKVFAQP.HYLENFVQSTFDALTADKIKGKTLVVSGDGRYYSEQAIQTIIKMSAANGVKSVWVGQDGLLSTPAVSAVIRGSKASGAFILTASHNPGGPNEDFGIKYNMENGGPAQEGVTNKIYENTTTIKEYLIAKELNVNISKTGVTSFSGP..DGQFDVEVF : ZMU89342
ZMU89342      : ..........................................................SGDGRYFSKDAVQIITKMAAANGVRRVWVGQNSLMSTPAVSAVIRGSKATGAFILTASHNPGGPTEDFGIKYNMGNGGPAPESVTDKIFSNTTTISEYLISEDLDVDISVVGVTSFSGP..EGPFDVDVF : S62629
S62629        : .......................................................MVVGSDGRYFSRTAIEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCPGGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENKFKPFRVEIV : S54585
S54585        : RNPKTIELCKKSDIQFGTAGLRQMQAGFSRMNTLVVIQASQGLATYVRQQFPDNVAVVGHDHRFHSKEFARATAAAFLLKGFKVHYLNPDEFVHTPLVPFAVDKLKASVGVMITASHNPKM...DNGYKVYYSNGPPHDHAISDSIDANLEPWANVWDFDDVNKALKQGKLMYSR....EEMLKLYLE : CPSG_MYCGE
CPSG_MYCGE    : QQIKELNSEIQELPLFGTAGVRKMAPGYHGMNVFSYAYLTQGYVKYIESINEPKRFLVARDTRKNGGLFLETVCDVITSMGHLAYVFDDNQPVSTPLVSHVIFKYGFSGGINITASHNPKD...DNGFKVYDHTGAQLLDTQTNQLLSDLPCVTSMLDLENPFVHTLDNEKVYKN....YFRELKKVL : SYCSLRD32

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181----- :
OrigSeq       : VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIV :OrigSeq
cons          : --EEEE----------------E---------HHHHHHHHHHHHHHHHH-----EEEE-------HHHHHHHHHHHHHHH---EEEEE---------HHHHHHH------EEEEE------------EEEEE-------HHHHHHHHHHHHHHHHHE--------------------------EEEE- :cons
dsc           : ----------------------EEEEE-------HHHHHHHHHHHHHHH-----EEEE-----HHHHHHHHHHHHHHHHHHHHHEEEE---------HHHHHH------EEEEEE-----------EEEEEE--------HHHHHHHH---HHHHHEE-----EEE-----------------EEEE- :dsc
mul           : -----------------------------------HHHHHHHHHHHH-------EEEE--------HHHHHHHHHHHH-----EEEE-----------EEEEE------EEEEE-------------EEE------------HHHHHH-------HHHHH-HHHH-----------------EEEEEE :mul
nnssp         : EEEEEE--------------------------HHHHHHHHHHHHHHH-------EEEE--------HHHHHHHHHHHHH----EEEE-----------HHHHHH------EEEE-------------EEEE--------HHHHHHHHHHHHHHHHHH--------------------------EEEEE :nnssp
phd           : --EEEE----------------E--------HHHHHHHHHHHHHHHHHH-----EEEEE------HHHHHHHHHHHHHHH---EEEEE--------HHHHHHHHEEE---EEEEE------------EEEEE-------HHHHHHHHHHHH---EEE-------------------------EEEEE- :phd
pred          : ---------------------------------HHHHHHHHHHHHHH------EEEEE-------HHHHHHHHHHHHH-----EEEEE---------HHHHHHHHHH---EEEEE------------EEEE---------HHHHHHH----------------------------------------- :pred
zpred         : ------------------------------------------------------EEEEEE------HHHHHHHHHHHHHHHHEEEEE-----EEEEEHEEEEEE----EEEEEEEE---------EEEEEE--------EHHHHHHHHH------EEHHHHHHHHH---------------HHHHHHH :zpred


access        : EEBEEBEBEE-EEEEEE-EEBEEEBEEBBEBEEBBBBBBEBBBEBB-EEEEEBBBBBBBEEB-BBBEEBBBBBBBBBBBEBBBBBBBBEEBBBB-EBBBBBBEEBEBBBBBBBBBB-EEE-EEEEBBBEBBBEEEEEBEEEBBEBB-EBBEEBEEBBBBEEBBBEBBEBEEB--EBEEE--EBBBEBB : access

PHD Rel       : 94354226776678789766512133213552689999999999865425798758981897321379999999999985671789815776677234552112031462799851589999998653787268999714478999996312210202211232223333112468888775046539 : PHD Rel
Pred Rel      : 00055668999990999998857676666777665888888888856777776590096898865588889999998867995999778998679856588797856866600969900009999976980899999997668877865856555565679988876666866788689987775000 : Predator Rel


dssp          : ---EEEE---------E--EEEEEHHHHHH---HHHHHHHHHHH---HHH----EEEEEE-----HHHHHHHHHHHHHH----EEEEEEEEE--HHHHHHHHHHH---EEEEE-----------EEEEEEEE----E--HHHHHHHHHHHHH--EEEE-----------EEEEE--------EEEEEE :dssp
define        : EEEEEEEEEEEE-EEEE--EEEEHHHHHHHH-HHHHHHHHHHHHH-------EEEEEEE-----HHHHHHHHHHHHHHHHH--EEEEE--EEEEHHHHHHHHHHHH---EEEE----EEEEEEEEEEEEEEE------HHHHHHHHHHHHHHH-EEEE--EEEEE---EEEEEE-----EEEEEEEEE :define
stride        : ---EEEE---------E--EEEEEHHHHHH---HHHHHHHHHHHH--HHH----EEEEEE-----HHHHHHHHHHHHHHH---EEEEEEEEE--HHHHHHHHHHH---EEEEE-----------EEEEEEE-----E--HHHHHHHHHHHHH--EEEE-----------EEEEEE------EEEEEEE :stride


Q3 values for 3pmgb-1-AS  View SS in Rasmol

	dssp	define	stride
phd	75.53	61.17	75.00
dsc	67.55	55.32	67.02
pred	65.43	51.60	64.89
mul	60.64	46.81	60.11
nnssp	70.21	59.57	69.68
zpred	55.32	43.62	55.32
cons	73.94	60.11	73.40