Results for 4rhv1


4rhv1        : TVASISSGPKHTQKVPILTANETGATMPVLPSDSIETRTTYMHFNGSETDVECFLGRAACVHVTEIQNKDATGIDNHREAKLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQPDSANYSSNLVVQAMYVPPGAPNPKEWDDYTWQSASNPSVFFKVGDTSRFSVPYVGLASAYNCFYDGYSHDDAETQYGITVLNHMGSMAFRIVNEHDEHKTLVKIRVYHRAKHVEAWIPRAPRALPYTSIGRTNYPKNTEPVIKKRKGDIKSY : POLG_POL3L
POLG_POL3L   : SLPDTKAGPAHSKEVPALTAVETGATNPLAPSDTVQTRHVVQRRSRSESTIESFFARGACVAIIEVDNEQPTTRA....QKLFAMWRITYKDTVQLRRKLEFFTYSRFDMEFTFVVTANFT.NNGHALNQVYQIMYIPPGAPTPKSWDDYTWQTSSNPSIFYTYGAPARISVPYVGLANAYSHFYDGFAKVPLDSLYSAMTVDDFGVLAVRVVNDHNPTKVTSKVRIYMKPKHVRVWCPRPPRAVPYY.GPGVDYKNWNRDLLVVESKAIARC : CAU05876
CAU05876     : TNASEHR..LGTGLVPALQAAETGASSNAQDENLIETRCVLNHHSTQETTIGNFFSRAGLVSIITMPTTGTQNTD......GYVNWDIDLMGYAQMRRKCELFTYMRFDAEFTFVAAKPNG....ELVPQLLQYMYVPPGAPKPTSRDSFAWQTATNPSIFVKLTPPAQVSVPFMSPASAYQWFYDGYPTFGADADYGQCPNNMMGTFSIRTVG.TEKSPHSITLRVYMRIKHVRAWIPRPLRNQPYLFKTNPNYK.SSRDLLVSSTTAIARC : POLG_COXB1
POLG_COXB1   : TVSSK...PTNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESSIENFLCRSACVYYATYNN.NSE........KGYAEWVINTRQVAQLLRRKLEFTYLRFDLELTFVITSAQEATSVDAPVQTQQIMYVPPGGPVPTKVTDYAWQTSTNPSVFWTEGAPPRMSIPFISIGNAYSCFYDGWTQFSRNGVYGINTLNNMGTLYMRHVNEAGQGPIKSTVRIYFKPKHVKAWVPRPPRLCQYEKQKNVNFNPYNRDLLVSTTTAIARC : HRU60874
HRU60874     : TLASVSSGPKHTQSVPALTANETGATLPTRPSDNVETRTTYMHFNGSETDVESFLGRAACVHVTEIKNKNAAGLDNHRKEGLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQPEASSYSSNLTVQAMYVPPGAPNPKEWDDYTWQSASNPSVFFKVGETSRFSVPFVGIASAYNCFYDGYSHDDPDTPYGITVLNHMGSMAFRVVNEHDVHTTIVKIRVYHRAKHVEAWIPRAPRALPYVSIGRTNYPRDSKTIVKKRTN.IKT. : ECHOV9XX
ECHOV9XX     : TIRSG...PSNSEAVPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESTIENFLCRSACVRMAKYEARGDPEST.....DRFDAWEISVRDMVQMRRKCEMFTYLRFDVEVTFVITSYQHSINQDMPPMTHQIMYIPPGGPFPKKVDGYEWQTSTNPSIFWTEGAPPRMSIPFISIGNAYSSFYDGWSHFDSKGAYGFNTLNKMGHIYCRHVNKETPAEVTSYIRIYFKPKHIRAWVPRPPRLCQYKNKANVNFEAYNRDLLVSTTTAIARC : POLG_HRV1B
POLG_HRV1B   : VPNIKESHHTTSNSAPLLDAAETGHTSNVQPEDAIETRYVMTSQTRDEMSIESFLGRSGCVHISRIKVDYNDYNG...VNKNFTTWKITLQEMAQIRRKFELFTYVRFDSEVTLVPCIAG..RGDDIGHVVMQYMYVPPGAPIPKTRNDFSWQSGTNMSIFWQHGPFPRFSLPFLSIASAYYMFYDGYDGDNSSSKYGSIVTNDMGTICSRIVTEKQEHPVVITTHIYHKAKHTKAWCPRPPRAVPYTHSRVTNYVPYSSDLIIYRTNTIPSC : CXU57056
CXU57056     : TVGTG...PTNSEAIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESTIENFLCRSACVYFTEYEN.SGA........KRYAEWVITPRQAAQLRRKLEFFTYVRFDLELTFVITSTQQTQNQDAQILTHQIMYVPPGGPVPDKVDSYVWQTSTNPSVFWTEGAPPRMSVPFLSIGNAYSNFYDGWSEFSRNGVYGINTLNNMGTLYARHVNAGSTGPIKSTIRIYFKPKHVKAWIPRPPRLCQYEKAKNVNFQPYNRDLLVSTTTAIARC : S76772
S76772       : TIARG...PSNSEQIPALTAVETGHTSQVDPSDTMQTRHVHNYHSRSESSIENFLCRSACVIYIKYSS.AESNNL.....KRYAEWVINTRQVAQLRRKMEMFTYIRCDMEQTFVITSHQEATNSVVPVQTHQIMYVPPGGPVPTSVNDYVWQTSTNPSIFWTEGAPPRMSIPFMSIGNAYTMFYDGWSNFSRDGIYGYNSLNNMGTIYARHVNDSSPGGLTSTIRIYFKPKHVKAYVRPPRRLCQYKKAKNVNFDVYNRDLLVSTTTAIARC : EV7A
EV7A         : .............VIPSLNAVETGATSNTEPEEAIQTRTVINMHGTAECLVENFLGRSALVCMRSFEYKNHSTSTSS.IQKNFFVWTLNTRELVQIRRKMELFTYLRFDTEITIVPTLRLFASSSGLPNLTLQVMYVPTGAPKPSSQDSFEWQSACNPSVFFKINPPARLTIPFMSINSAYANFYDGFAGFEKTDLYGINPANTMGNLCLRVVNSYQPVQYTLTVRVYMKPKHIKAWAPRAPRTMPYTNILNNNY..MPNDIDLTTA...... : S44194
S44194       : TLPTG...PRNSESIPALTAAETGHTSQVVPGDTMQTRHVKNYHSRTESSVENFLCRAACVCITKYKT.KDSDPV.....QRYANWRINTRQMAQLRRKFELFTYLRFDMEVTFVITSSQDQLAQDMPVLTHQVMYIPPGGPVPNSATDFAWQSSTNPSIFWTEGAPARMSIPFISIGNAYSNFYDGWSHFTQDGVYGFNSLNNMGSIYIRHVNEQSPYAITSTVRVYFKPKHVRAWVPRPPRLCAYEKSSNVNFKPYNRDLLVSTTTAIARC : POLG_HRV2
POLG_HRV2    : VPNINSSNPTTSNSAPALDAAETGHTSSVQPEDVIETRYVQTSQTRDEMSLESFLGRSGCIHESKLEVTLANYN.....KENFTVWAINLQEMAQIRRKFELFTYTRFDSEITLVPCISA..LSQDIGHITMQYMYVPPGAPVPNSRDDYAWQSGTNASVFWQHGAYPRFSLPFLSVASAYYMFYDGYD..EQDQNYGTANTNNMGSLCSRIVTEKHIHKVHIMTRIYHKAKHVKAWCPRPPRALEYTRAHRTNFKIYSSDLIIYRTNTIPSC : CXACAPR
CXACAPR      : TQVSQHS..IETGRVPALQAAETGATSNASDENLIETRCVVNKNSVEEASLNHFFSRAALVGKVELNDTGTAAT.......GFTNWNIDIMGYAQLRRKLEMFTYMRFNAEFTFVATTRAG....RVPSRVLQYMYVPPGAPKPDGREAFQWQSSTNPSVFSKMTPPPQVSVPFMSPASAYHGFYDGYPTFGEDSLRTGNANNALGTFSVRFVS.EEITNERIIIRIYMRLKHIRAWVPRPLRSEPYVLKNFPNY..SSRDLLVSSTTGIARC : POLG_COXA2
POLG_COXA2   : QLKQP..NGVNSQEVPALTAVETGASGQAIPSDVVETRHVINYKTRSESCLESFFGRAACVTILSLTNSSKSGEE....KKHFNIWNITYTDTVQLRRKLEFFTYSRFDLEMTFVFTENYP.ASGEVRNQCDQIMYIPPGAPRPSSWDDYTWQSSSNPSIFYMYGAPPRMSIPYVGIANAYSHFYDGFARVPLDTFYGLVSINDFGVLAVRAVNRSNPHTIHTSVRVYMKPKHIRCWCPRPPRAVLYR.GEGVDMISWDRDLMVVESRAIARC : POLG_COXA4
POLG_COXA4   : QLTAQSTSGVNSQEVPALTAVETGVSGQAIPSDVIETRHVVNYKTRSESTLESFFGRSACVTMLEVENFNATTEADK..KKQFTTWAITYTDTVQLRRKLEFFTYSRFDLEMTFVITERYY.NTGYARNQVYQLMYIPPGAPRPTAWDDYTWQSSSNPSVFYTYGAPPRISIPYVGIANAYSHFYDGFARVPLDTYYGLVTINDFGTLAVRVVNEFNPARIISKIRVYMKPKHVRCWCPRPPRAVPYR.GEGVDFKQWNRDLMIVSSRAIARC : POLG_HRV89
POLG_HRV89   : VPNIQPSTSVSSHAAPALDAAETGHTSSVQPEDMIETRYVITDQTRDETSIESFLGRSGCIAMIEFNTSSDKTEHDK.IGKGFKTWKVSLQEMAQIRRKYELFTYTRFDSEITIVTAAAA..QGNDSGHIVLQFMYVPPGAPVPEKRDDYTWQSGTNASVFWQEGPYPRFTIPFMSIASAYYMFYDGYDGDSAASKYGSVVTNDMGTICVRIVTSNQKHDSNIVCRIYHKAKHIKAWCPRPPRAVAYQHTHSTNYIPYSSDLIIYRTNTIPNC : HRVPP
HRVPP        : VPNINQSHPTTSNAAPVLDAAETGHTNKIQPEDTIETRYVQSSQTLDEMSVESFLGRSGCIHESVLDIVDNYND......QSFTKWNINLQEMAQIRRKFEMFTYARFDSEITMVPSVAA..KDGHIGHIVMQYMYVPPGAPIPTTRDDYAWQSGTNASVFWQHGPFPRFSLPFLSIASAYYMFYDGYDGDTYKSRYGTVVTNDMGTLCSRIVTSEQLHKVKVVTRIYHKAKHTKAWCPRPPRAVQYSHTHTTNYKLYSSDLIIYRTSTIPTC : E6U16283
E6U16283     : TLPSG...PSNSESIPALTAAETGHTSQVVPSDTIQTRHVRNFHVRSESSVENFLSRSACVYIVEYKT.QDTTPD.....KMYDSWVINTRQVAQLRRKLEFFTYVRFDVEVTFVITSVQDRQNTDTPVLTHQIMYVPPGGPIPHAVDDYNWQTSTNPSVFWTEGAPPRMSIPFMSVGNAYSNFYDGWSHFSQTGVYGFNTLNNMGKLYFRHVNDRTISPITSKVRIYFKPKHVKAWVPRPPRLCEYTHKDNVDYEPYNRDLLVSTTTAIARC : EV16VP2GN
EV16VP2GN    : TISSG...PTNSEQVPALTAAETGHTSQVVPGDTIQTRHVKNYHSRSESTIENFLCRSACVHIARYEAGANASNE.....DRFVRWEINNKELVQLRRKCEMFTYLRYDVEVTFVITSQQDDLSQDMPVLTHQVMYVPPGGSVTKQGDSYAWQTSTNPSVFWTEGAPPRMSIPFISIGNAYSSFYDGWSHFSQKGVYGYNTLNKMGTLFVRHVNKETPKPVTSTVRVYFKPKHIRAWIPRPPRLCPYKYKANVNFDV................ : POLG_COXA9
POLG_COXA9   : TMRTG...PSNSASVPALTAVETGHTSQVTPSDTMQTRHVKNYHSRSESTVENFLGRSACVYMEEYKT.TDKHVN.....KKFVAWPINTKQMVQMRRKLEMFTYLRFDMEVTFVITSRQDTLAQDMPVLTRQIMYVPPGGPIPAKVDDYAWQTSTNPSIFWTEGAPARMSIPFISIGNAYSNFYDGWSNFDQRGSYGYNTLNNLGHIYVRHVSGSSPHPITSTIRVYFKPKHTRAWVPRPPRLCQYKKAFSVDFTPYNRDLLVSTTTA.... : EV11VPCD
EV11VPCD     : TIGSG...PSNSQAVPALTAVETGHTSQVTPSDTMQTRHVKNYHSRSESSIENFLSRSACVYMGGYHT.TNTDQT.....KLFASWTISARRMVQMRRKLEIFTYVRFDVEVTFVITSKQDRLGQDMPPLTHQIMYIPPGGPIPKSVTDYAWQTSTNPSIFWTEGAPPRMSIPFISIGNAYSNFYDGWSHFSQNGVYGYNTLNHMGQIYVRHVNGSSPLPMTSTVRMYFKPKHVKAWVPRPPRLCQYKNASTVNFTPYNRDLLISTTTAIARC : S45042
S45042       : TTESHHS..ISTENTPALQAAETGATSNASDEGLIETRNVVDTHGVEETSVEAFFGRSGLVG...MTSTVGG..........IGRWIVNFGEFVQVRAKLELFTYVRFDIELTIVAEVLTQ.NKVAHQHVNYQVMYVPPGASEPENQDSYQWQSSCNPSVISNTAPPARVSIPFMSTANAYSMSYDGYATFDDGSNYGMVPSNYLGTIVFRTM..EDLDQKLLKVRFYAKPKHLKCWMPRAPRAVPYKSRYTGVYD................. : POLG_BOVEV
POLG_BOVEV   : TTTSTHS..VATDSTPALQAAETGATSTARDESMIETRTIVPTHGIHETSVESFFGRSSLVG...MPLLATGTS........ITNWRIDFREFVQLRAKMSWFTYMRFDVEFTIIATSSTG.NVTTEQHTTYQVMYVPPGAPVPSNQDSFQWQSGCNPSVFADTDPPAQFSVPFMSSANAYSTVYDGYARFMDPDRYGILPSNFLGFMYFRTL..EDAAHQVR.FRICAKIKHTSCWIPRAPRQAPYKKRYNLVFSGYQRDLLVTRVDAIARC : D89110

             : 17--------27--------37--------47--------57--------67--------77--------87--------97--------107-------117-------127-------137-------147-------157-------167-------177-------187-------197-------207-------217-------227-------237-------247-------257-------267-------277-------287 :
OrigSeq      : TVASISSGPKHTQKVPILTANETGATMPVLPSDSIETRTTYMHFNGSETDVECFLGRAACVHVTEIQNKDATGIDNHREAKLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQPDSANYSSNLVVQAMYVPPGAPNPKEWDDYTWQSASNPSVFFKVGDTSRFSVPYVGLASAYNCFYDGYSHDDAETQYGITVLNHMGSMAFRIVNEHDEHKTLVKIRVYHRAKHVEAWIPRAPRALPYTSIGRTNYPKNTEPVIKKRKGDIKSY :OrigSeq
cons         : ----------------HHH---------------EEEEEEE--------HHHHHH----EEEEEEEE-----------------EEEE-HHHHHHHHHHHHEEEEEEEEEEEEEEEEE-----------EEEEEEEE--------------EE------EEEE------EEEEEE------EE---------------EEEE----EEEEEEE-------EEEEEEEEE-----EEE------------------------EEEE----E--- :cons
dsc          : ---------------EEEEEE-----EEE-----EEEEEEEEEE-----EEEE------EEEEEEEE---------------EEEEEEE--HHHHHHHHHEEEEEEEEEEEEEEEEEE-----------EEEEEEEE------------EEEE-----EEEEE------EEEEEEE------EEE-------------EEEE-----EEEEEE-------EEEEEEEEE-----EEE--------------EEEE-----EEEEE-------- :dsc
mul          : ----------------HHHH---------------E-EE-----------HHHHH---HEEEEE-H-------------------EEE----HHHHHHHHHHHHHHH---HEEEEEE------------EEEEEEEE----------------------EEEE----------EE-------E------------------------EEEEE---------EEEEEEE------H---------EE---------------EEEEE------- :mul
nnssp        : ----------------------------------EEEEEEE--------HHHHHH----EEEEEEE-----------------------HHHHHHHHHH--EEEEEEE---EEEEEE-------------EEEEEE-----------------------EEE-----------EE--------------------------------EEEEEE-------EEEEEEEEE-----EEE------------------------EEEE----EE-- :nnssp
phd          : ----------------HHH----------------EEEEEE-------HHHHHHH----EEEEEEEE-----------------EEEE-HHHHHHHHHHHHEEEEEEEEEEEEEEEEE-----------EEEEEEEE--------------EE------EEEE-----EEEEEEE----EEEE---------------EEEE----EEEEEEE-------EEEEEEEEE---------------------------------EEEEE--E--- :phd
pred         : ----------------HHHHH---------------EEEEE--------HHHHHHH--EEEEEEE----------------------HHHHHHHHHHHHHHHHHHHHHHHEEEEEEE-------------EEEEEEE----------------------EEEE------------------EEE----------------------EEEEEEE-------EEEEEEEEE-----EEE------------------------------------ :pred
zpred        : --------------EHHHHHHHH----------HHHHHEE---------HHHHHHHHHHHEEEEE--------------------------HHHHHHHHHHEEEHHHHHHHHHHHH-------------EEEEEEEEE----------EEEEE------EEE-------EEEEEEEEEEEEEEEEE-----------EEEEE----EEEEEE---------EEEEEHHHHH-EEEEEE-----EEEEE------------------------- :zpred


access       : EEEEEEEEEEBBEBBEBBBBBEEEEEBEB-BEEBBEB-BBBB-EE-EEBBBEBBBB-BBBBBBBEBEBEEEEEEEEEEBEEEBBBBBBBBEEBBEB-EEBEBBBBB-BEBEBBBBBBBEEEE-EEEBBBBBBBBBBB-EE-E-EEE-EEBBBEEEEEBBBBBBEE-EEEBBBBBBBBBBBBBBBBEBBEEBEEEBB-BBBBBE-BBBBBB-BBEEEEEEEBBBBB-B-BEBEEBEBBBEE-EEBBE-EEEEEBEBEE-BEEBBBBBBEBBBEB : access

PHD Rel      : 998899998545676445112248856477985514688620468751315772044426999974147788889877654454245233688999985313668773479999987325777788762279999742899987777653212399972465158994376333101122321124652346788411023224652899995478999525899999627442343568787655444576555546765178621111139 : PHD Rel
Pred Rel     : 006777999990996687886699877789996755555556779776668888866668886566799987779977766655555568889900099998087755665887966569999998878556580000000999999987760899997099889900077766667888856789988899997777777998666688965679998865666066667755550700098677668777787899988555697777000 : Predator Rel


dssp         : -EEE--E----------EE-HHH-------HHH---E--EE-----HHHEHHHHH---EEEEEEEEEE---------HHH--EEEEE------HHHHHHH--EEEEEEEEEEEEEEEEE-----------EEEEEE-------------HHHH-----EEEEE---EEEEEE--------EE----E-------------HHH---EEEEEE--------EEEEEEEEEEEEEEEEEEE---E------------------------------ :dssp
define       : --EEEE-EEEEEEEEE------------------EEEEEE---------HHHHHHHEEEE-EEEE----------HHHHHH--EEEEE-----HHHHHHHHH-EEEEEEEEEEEEEEEE--EEEEEEEEEEEEEEE----EEEE----HHHHHH--EEEEEE---EEEEEEEEE--------------------EEEE------EEEEEEE-EEEE---EEEEEEEEEEEEEEE--EEEEEEEEEEEE--------------EEEE------- :define
stride       : -EEE--E----------EE-HHH-------HHH---E--EE--------EHHHHH---EEEEEEEEEE---------HHH--EEEEEE-----HHHHHHHH-EEEEEEEEEEEEEEEEE-----------EEEEEE-------------HHHH-----EEEEE--EEEEEEE--------EE----E------------------EEEEEEE--------EEEEEEEEEEEEEEEEEEE---E------------------------------ :stride


Q3 values for 4rhv1  View SS in Rasmol

	dssp	define	stride
phd	73.63	61.54	74.36
dsc	68.50	54.95	69.60
pred	71.79	56.41	73.63
mul	65.93	58.61	68.13
nnssp	71.43	60.07	72.16
zpred	61.54	52.01	62.27
cons	73.99	61.90	75.46