Results for 4ts1a


4ts1a        : MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIETGISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGRAFGLTIPLVTKADGTKFGKTESGTIWLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRYA : SYYM_YEAST
SYYM_YEAST   : DNILDELKQRGLVSQVSQESFLRTKLNGNKIKLYCGVDPTAQSLHLGNLVPLMVLLHFYVKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTGLGFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPLPFGITVPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKIVETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALS : SYY_ECOLI
SYY_ECOLI    : SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRIT : SYY1_BACSU
SYY1_BACSU   : TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQLAGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAVIANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRIESGISYTEFSYMILQSYDFLNLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEKAFGLTIPLVTKADGTKFGKTEGGAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKRLAEEVTSLVHGREALEQAINIS : S73499
S73499       : KDLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIFQAMGHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFLGS.....NVVFCQNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARWERGLTLMELNYMVLQAYDFYYLNQKYGVQLQIGGSDQWANILAGADLIRRKTQQVYGMTTNLLVKANGEKMGKSASGALWLDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLK..GAAIKEAKAKLAFELTDAIHGTKAALVAQAKS : SYY_MYCGE
SYY_MYCGE    : NNILQFLKERELYSQANFETELDNHLKEKKNNFYVGFDPTANSLHIGNYVLIHIAKLLKDMGHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFLG......DVIIHENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSARWEKGLTLMELNYMILQAYDFYYLHKNHNVTLQIGGSDQWANILAGANLIKRKNNSVFGLTANLLVKANGEKMGKTSSGALWLDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLK..GPKIKQTKQMLAFLITELIHGTKKAKEAQQRS : CELK08F111
CELK08F111   : SSFVDYITDLNARKQLQHPTDLLSKCSEDPPYVYAGFDPTAESLHIGNLLILVNLIRAQQFGIRPIALIGEFTASIGDPSGKKSERGLLAGDVIMHNSRKVTDQICKIFENAPGSSKPIIVNNNDWLGKISLRDFLRECK.NMQVGKMLRMNTIKNRLEVGLSYTEFSYQTMQAFDWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMNFAAGVCFPILTDSTGAKLGKSEGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLFSLQDIEHIRDVLKNHRSNLGQWIAQRELAAEITRIVHGKEGLEVAMRCT : SYYM_NEUCR
SYYM_NEUCR   : QNTWDLFEERGYVKDTAGKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWMYLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGVSFAEFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAAREECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKLFTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQH : SYYM_PODAN
SYYM_PODAN   : QHTWDMFVERGYVKDTAGHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHGYAGYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQAKRAVVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGMSFSEFTYPLMQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDDPVGFTVPLLTDSAGVKFGKSAG.NAFLDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPMENINEAMKIHSENPARRVAQHLLAFEVVGLVHGMNAAHRTALNH : D9090418
D9090418     : DWLWRGTAEIFPHNADSNPQEHLGILTQQPLRVKLGIDPTGTDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTADQVKRNAESYLAQLKPILDFDTPG.RLEIRYNSEWLSNLDLNKILELLA.TMTVGQMLAKEGFAERFQKPIFLHEFLYPLMQGYDSVAVNAD....VELGGTDQKFNIAVGRDLQRHFGKPQFGLLLPILLGTDGQKMSKSLNNYVGLQED...ALSMYSKLEKTPDRLLGEYFELLTNLDLAELP.....E..NP..RECQKLLAKEVTAQFHGVAGAIAAQKTA : SYY2_BACSU
SYY2_BACSU   : KEVERQLQLYMTGAHEVIPEELKAKLVKSPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLLIGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLDPE....KVELHYNSKWLKTLNLEDVIELAG.KITVARLMERDDFEERIAMPISLHEFFYPLMQGYDSVVLESD....IELGGTDQHFNVLMGRHFQERYNKKQVVILMPLLEGLDGVKMSKSKHNYIGINEH...PNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAHPRDAKMLLARTIVRMYHGEKAAEAAEHSF : SYY_HAEIN
SYY_HAEIN    : TDINTVLAELKRGTDEILEADLIEKLKENPLKVKLGADPTAPDIHLGHTVVLNKLRQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ....KTKIVFNSEWLSKLGTXGMIRLAS.NYTVARMLERDDFKKRFGNPIAIHEFIYPLLQGYDSVALDAD....VELGGTDQKFNLLVGRELQKSAGKPQVAITLPLLVGLDGEKMSKSLGNYIGVTEA...PSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRDVKILLAKELIARFHNEEAANAAEQEF : SYY_THIFE
SYY_THIFE    : MKHQDAFEQIAFGTVDMLEGEMLARLAAAPLRIKLGMDPTAPDLHLGAYVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEVVANAATYRPQVFKILDPE....RTEVMFNSEWLGALRPEELIQIAA.CYTVARMLERDDFNKRYSAPIAIHEFLYPLLQGYDSVAIKAD....VELGGTDQRFNLLVGRELQREYGQPQLVLTMPILEGLDGVKMSKSLGNFIAVEDP...PAEMFGKIMSISDFLMWRYYALLSRVPAVEQTRLQKEAASGANPRDIKLDLAGELVRRFHGTAAAQEAHIAF : HBB_LATCH

             : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------223-------233-------243-------253-------263-------273-------283-------293-------303-------313---- :
OrigSeq      : MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIETGISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGRAFGLTIPLVTKADGTKFGKTESGTIWLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRYA :OrigSeq
cons         : --HHHHHHHH--------HHHHHHHHHH---EEEE-------------HHHHHHHHHHHH----EEEEE-------------HHHHHHH-HHHHHHHHHHHHHHHHHHH--------EEEE---HHH----HHHHHHHH-----HHHHHHHHHHHHHHH----HHHHHHHHHHH--EEEEH-----EEEE----HHHHHHHHHHHHHHH----EEEEEEEEE-------------EEEE-------HHHEEEEE---HHHHHHHHHHHHH--HHHHHHHHHHH-----HHHHHHHHHHHHHHHH---HHHHHHHH-- :cons
dsc          : ---HHHHHHHHHHHHHHHHHHHHHHHHH---EEEE-------------HHHHHHHHHHHHH---EEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHH--HHHHHHHH--HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHHHHH----EEEEEE-------HHHHH---EEE------------HH-----HHHHHHHHHHHHH--HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH--- :dsc
mul          : --HHHHHHHH-H---H-HHHHHHHHHH----EEEE--------H----EEHHHHHHHHHH-----EEEE----------------HHHHHHHHHHH--H-HHHHHHHHHH-------HHEE----------HHHHHHHHH-HHHHHHHHHHHHHH----------H------H---HEEE------EEEE------------HHHHH------EEEEEEEEE-----H--------EHH-----------HHH-------HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-HHHHHHHHH-- :mul
nnssp        : HHHHHHHHHH--------HHHHHHHHHH---EEEE-------------HHHHHHHHHHHH-----EEEE-------------HHHHHHH-HHHHHHHHHHHHHHHHHHHHH-------EE-----------HHHHHHHH-----HHHHHHHHHHHHHHH----HHHHHHHHHHH--HHHHHHH--EEEEE-------HHHHHHHHHHHH----EEEE-------------------EEE-------HHHHHHHH---HHHHHHHHHHHHH--HHHHHHHHHHHH----HHHHHHHHHHHHHHHH---HHHHHHHHHH :nnssp
phd          : --HHHHHHHH--------HHHHHHHH-----EEEE-------------EEEEEHHHHHHH----EEEEE---EEEE------HHHHH----HHHHHHHHHHHHHHHHHH--------EEEE---HHH----HHHHHHHH-----E------HHHHHHH----EEEEEEHHHHH---EEEEE-----EEEE----HHH--E--HHHHHH-----EEEEEEEEE-------------EEEE-------HHHEEEEE---HHHHHHHHHHHH---HHHHHHHHHHH-----HHHHHHHHHHHHHHHH---HHHHHHHH-- :phd
pred         : ---HHHHHHHHHHH----HHHHHHHHHHHHEEEEE--------------HHHHHHHHHHH----EEEEE--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHH------HHHHHHHHH--EEEE-----EEEEE----------HHHHHHHHHH---EEEE-EEEE--------------EEEE---------EEEE-----HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH--HHHHHHHH--- :pred
zpred        : -HHHHHHHH--------HHHHHHHHHHH---EEEEEEE--HHHHEEEEEEEEEHHHHHH-----EEEEEEEEEEEEEE------HHH--HHHHHHHHHHHHHHEEEEEE---------EEEE----------HHHHHHH----HHEHHHHHHHHHHHH----EEEHHHHHHHHEEEEEE-------EEEEE---EEEEE--HHHHHH------EEEEEEEEHHHHHHHHEE-----EEEE--------EEEEEE----HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH- :zpred


access       : EE--EBBEE-E-BEEEEEEEEBEEEBEEEEBEB-BEBEEEBEBBBBBBBBBBBBB-BBEEBE--BBBBBBEBBB-BEEEEEEEEEEEE-EEE-BEEEBEEBEEEBEEBBEEEEEE-EBBBBE--EBBEEBEBBEBBEEBBEEBBBBEBBBEEEBEEEBEEBBBBBEBBBBBBEBBEBBBB-EEEEBEBEBEEEEEBBEBBBBBEBBEE-EEEBBBBBBEBBBE-EEEEBEEE-EEBBBBEEEEE-EBEBBBBBBE--EEEBEEBBEBBBBBE-EEBEEBBEE-EEEEEEEEBEE-BBEEBBBBBEB-EBBEEBEEEE : access

PHD Rel      : 97578888741345555357899986157652786689677521125335421357887448634888625146766998742231113313678879999999988634898898147741731313432379999862442100101220467753166524212034321231677742777178855975134101232477642787257888676337874345335863774788887144224354256179999998751255268888887644788617999999999988742413589999718 : PHD Rel
Pred Rel     : 00766699966855577778889998766656766889999986566676887898888778966999669876778999966568885778888778889999988767899989976766786858866888777866665687888766668886799666577588888666567687766608969999975567666887788798766606777679897555699967898799909706555555679768899998888655889999999876897767899999999898986988997776000 : Predator Rel


dssp         : -HHHHHHHH-----EE--HHHHHHHHHH---EEEEEE-------E---HHHHHHHHHHHH---EEEEEE---HHH---------------HHHHHHHHHHHHHHH-------------EEEE-HHHH---EHHHHHHH-HHH-EHHHHH--HHHH-------EHHHH-HHHHHHHHHHHHHHHH-EEEEEEEHHHHHHHHHHHHHHHHHH---EEEEE------------E----E-E-------HHHHHHHHH------HHHHHHHH----HHHHHHHHHHHHH-----HHHHHHHHHHHHHHH-HHHHHHHHHH- :dssp
define       : HHHHHHHHHHH------HHHHHHHHHHHHEEEEEEEEEE---EEEE-HHHHHHHHHHHHHHEEEEEEEEEHHHHHH-------EEEEE-HHHHHHHHHHHHHHHHH----------EEEEE---HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--EEEE----HHHHHHHHHHHHHHHH-----EEEEEEEE------------EEEE-----HHHHHHHHHHHH----HHHHHHHH---HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH-- :define
stride       : HHHHHHHHHH----EE--HHHHHHHHHH---EEEEEE-------EHHHHHHHHHHHHHHHH--EEEEEE---HHH---------------HHHHHHHHHHHHHHHH------------EEEEHHHHHH--EHHHHHHHHHHH-EHHHHHH-HHHHH------EHHHHHHHHHHHHHHHHHHHHH---EEEEEHHHHHHHHHHHHHHHHHH---EEEEE------------E----E-E-------HHHHHHHHHH----HHHHHHHHH----HHHHHHHHHHHHH-----HHHHHHHHHHHHHHH-HHHHHHHHHH- :stride


Q3 values for 4ts1a  View SS in Rasmol

	dssp	define	stride
phd	69.09	66.56	67.82
dsc	71.29	71.29	72.24
pred	66.25	69.40	65.30
mul	67.51	64.04	65.30
nnssp	76.97	72.56	76.66
zpred	62.46	63.41	62.15
cons	75.08	74.45	74.76