Results for 6tmne


6tmne        : ITGTSTVGVGRGVLGDQKNINTTYSTYYYLQDNTRGDGIFTYDAKYRTTLPGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAIRSSVHYSQGYNNAFWNGSEMVYGDGDGQTFIPLSGGIDVVAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGDSLRSMSDPAKYGDPDHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTHYGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVGVK : NPRM_BACME
NPRM_BACME   : VTGTNTIGSGKGVLGDTKSLKTTLSSTYYLQDNTRGATIYTYDAKNRTSLPGTLWADTDNTYNATRDAAAVDAHYYAGVTYDYYKNKFNRNSYDNAGRPLKSTVHYSSGYNNAFWNGSQMVYGDGDGTTFVPLSGGLDVIGHELTHALTERSSNLIYQYESGALNEAISDIFGTLVEYYDNRNPDWEIGEDIYTPGTSGDALRSMSNPAKYGDPDHYSKRYTGSSDNGGVHTNSGIINKAAYLLANGGTHYGVTVTGIGGDKLGKIYYRANTLYFTQSTTFSQARAGLVQAAADLYGSGSQEVISVGKSFDAVGV. : BTNPR
BTNPR        : ITGTSTVGVGRGVLGDQKNINTTYSTYYYLQDNTRGNGIFTYDAKYRTTLPGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHELTHAVTDYTAGLIYQNESGAINEAMSDIFGTLVKFYANKNPDWEIGEDVYTPGISGDSLRSMSDPAKYGDPDHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTHYGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVGVK : NPRE_BACSU
NPRE_BACSU   : ......TGSGTTLKGATVPLNISYEGKYVLRDLSKPTGIITYDLQNR..LPGTLVSSTTKTFTSSSQRAAVDAHYNLGKVYDYFYSNFKRNSYDNKGSKIVSSVHYGTQYNNAAWTGDQMIYGDGDGSFFSPLSGSLDVTAHEMTHGVTQETANLIYENQPGALNESFSDVFGYFND.....TEDWDIGEDIT...VSQPALRSLSNPTKYNQPDNYANYRNLEGDYGGVHTNSGIPNKAAYNTIT..........KLGVSKSQQIYYRALTTYLTPSSTFKDAKAALIQSARDLYG..STDAAKVEAAWNAVG.. : PRO2_LISMO
PRO2_LISMO   : ......ADTHKDFQALQRPLHVMKIDLFYLVDRTHKGLTFDLNHKTD...FGKVVSNKTNMFTDPEFSSAVDAHFYASEVYDYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGREILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIA.....PNHWLIGEDVCVRGLRDGRIRSIKDPDKYNQAAHMKDYESLEGDWGGVHFNSGIPNKAAYNTIT..........KLGKEKTEQLYFRALKYYLTKKAQFTDAKKALQQAAKDLYG..EDASKKVAEAWEAVGV. : ENEGE1E
ENEGE1E      : ......EVTLKNSFQVTFNVPVEKSTGIALHGTDN.TGHAVVDGKNN....YSIIQ..APS.LATLNQNAVDAYTHGKFVKTYYEDHFQRHSIDDRGMPILSVVDEQDAYDNAFWDGKAMRYGETSTPTGKTYASSLDVVGHEMTHGVTEHTAGLEYLGQSGALNESYSDLMGYIISG....ASNPEIGADTQS.VDRKTGIRNLQTPSKHGQPETMAQYDDRYYDQGGVHYNSGIINRIGYTIIQN..........LGIEKAQTIFYSSLVNYLTPKAQFSDARDAMLAAAKVQYG..DEAASVVSAAFNSAGIG : TVTLPE1
TVTLPE1      : .................STWCIECSFSDVLGNLVE.......NKNDPKWLLGEDVT.TPGIAGDALRSMSNPNEYGQPGHMNEYQNLPNTREGD......WGGVHINGIPNKAFYNFVTHTWHHQRQ...RRQ....DLVTVRVTQYLTSYS...QFIDARNATIQAATDLFGANSLEAN..CRSQCLGQRRRRLRKQRRQRRCLRTKHVRGQSHDLRSTYNGISSPTDVDWFKFTPSKSTYLSLS........LTNLPADYDLYLYNSSGTLLARSEGTSSESIAGTIQGGATYYVK.VVASESIAGTIQGGATY : ELAS_PSEAE
ELAS_PSEAE   : .........GPGGNQKIGKYTYGSDGPLIVNDR..MDDVITVDMNSSTTPFRFACPTNTYKQVNGAYSPLNDAHFFGGVVFKLYRDWFGTSPLT...HKLYMKVHYGRSVENAYWDGTAMLFGDGAT.MFYPLVS.LDVAAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMRGKNDFLIGYDIK...KGSGALRYMDQPSRDGRIDNASQYYNG....IDVHHSSGVYNRAFYLLANS........PGWDTRKAFEVFVDANRYYWTATSNYNSGACGVIRSAQNRNYS....AADVTRAFSTVGVT : VVU48780
VVU48780     : ........TGPGGNSKTGRYEFG.TYPSFVIDKVGMENVKTVDLQNRSTAYSYSCPYNDHKAVNGAYSPLNDAHYFGKVVYDMYKDWMNTAPLT...FKLTMRVHYSSNYENAFWDGSAMTFGDGAS.TFYPLVD.INVSAHEVSHGFTEQNSGLIYSNMSGGMNEAFSDIAGEAAEFYMKGSVDWIVGADIF...KSNGGLRYFDQPSKDGRIDHASQYYDG....LNVHHSSGVYNRAFYLLANK........TGWNVRKGFEIFTLANQLYWTANSTFDAGACGVVKAAQDMGYN....SNDVAEAFNQVGVN : HAPT_VIBCH
HAPT_VIBCH   : ........TGPGGNQKTGRYEYGSNLPGFTIDKTGMNNVKTVNLNGGSTAFSYACNYNSVKTVNGAYSPLNDAHFFGKVVFDMYQQWLNTSPLT...FQLTMRVHYGNNYENAFWDGRAMTFGDGYT.RFYPLVD.INVSAHEVSHGFTEQNSGLVYRDMSGGINEAFSDIAGEAAEYFMRGNVDWIVGADIF...KSSGGLRYFDQPSRDGRIDHASQYYSG....IDVHHSSGVFNRAFYLLANK........SGWNVRKGFEVFAVANQLYWTPNSTFDQGGCGVVKAAQDLNYN....TADVVAAFNTVGVN : PRT1_ERWCA
PRT1_ERWCA   : .............RPE.PHEKLPAGANRSIHDAEQ.........QQQ..LPGKLVRAEGQP..SNGDIAVDEAYSYLGVTYDFFWKIFQRNSLDAEGLPLAGTVHYGQDYQNAFWNGQQMVFGDGDGKIFNRFTIALDVVAHELTHGITENEAGLIYFRQSGALNESLSDVFGSMVKQYHLGQADWLIGAELLADGIHGMGLRSMSHPTAYDDPSHMNEYVNT.EDNGGVHLNSGIPNRAFYLAAIALG.......GHSWEKAGRIWYDTLCDKTLPQADFEIFARHTIQHAAKRFN..HTVADIVQQSWETVGVE : SEPA_STAEP
SEPA_STAEP   : ......TGTGKGVLGDTKQININSVGGYALQDLTQQGTAYNYDANTG.....YLMQDKDRNFDDDEQRAGVDANYYAKETYDYYKNTFGRESYDNQGSPIISLAHVNDNRNNAAWIGDKMIYGDGDGRTFTALSGANDVVAHEITHGVTQQTANLVYRSQSGALNESFSDVFGYFVD.....DEDFLMGEDVYTPGVGGDALRSMSNPERFGQP.SHMNDFVYNG...GVHTNSGIPNKAAYNTIR..........SIGKQRSEQIYYRALTVYLTSNSDFQDAKASLQQAALDLYG..EGIAQQVGQAWDSVG.. : CLOMP
CLOMP        : .....TTGSGIAVNGDLTNLNVYKYNKYYLQDRTKDMSINTYTANHRYTDNGSLIYNYTQD...INDPAAVSAHSYAGVVYDFYKNIFNRNSIDDNGMSIDSVVHYGSNYNNAYWNGYKMIYGDGDNVNFTMLSGDLDVVGHEMTHGVVTNTCNLNYENQSGALNESISDVFGVLIQTYEKYPSDWVIGDEIYTPGIKGDALRSLANPTLYDQPDHMKNYYNLNGDYGGVHINSGIPNKAAYNLAS..........TLGCEKTARIYYRATTQYFNSTTSFVEARLGLVQAAKDLYGNNSLEAEAVGNAFSNVGI. : NPRB_BACSU
NPRB_BACSU   : ........TGIGVSGDEKSFDVTEQGRFYLADETRGKGINTFDAKNLSQLIGYTGKEIVSGTSVFNEPAAVDAHANAQAVYDYYSKTFGRDSFDQNGARITSTVHVGKQWNNAAWNGVQMVYGDGDGSKFKPLSGSLDIVAHEITHAVTQYSAGLLYQGEPGALNESISDIMGAMAD.....RDDWEIGEDVYTPGIAGDSLRSLEDPSKQGNPDHYSNRYTGTEDYGGVHINSSIHNKAAYLLAEGGVHHGVQVEGIGREASEQIYYRALTYYVTASTDFSMMKQAAIEAANDLYGEGSKQSASVEKAYEAVGIL : NPRE_BACBR
NPRE_BACBR   : ATG.......KGVLGDTKQFETTKQSTYMLKDTTRGKGIETYTANNRTSLPGTLMTDSDN...YWTDGAAVDAHAHAQKTYDYFRNVHNRNSYDGNGAVIRSTVHYSTRYNNAFWNGSQMVYGDGDGTTFLPLSGGLDVVAHELTHAVTERTAGLVYQNESGALNESMSDIFGAMVD.....NDDWLMGEDIYTPGRSGDALRSLQDPAAYGDPDHYSKRYTGSQDNGGVHTNSGINNKAAYLLAEGGTHYGVRVNGIGRTDTAKIYYHALTHYLTPYSNFSAMRRAAVLSATDLFGANSRQVQAVNAAYDAVGVK : NPRE_BACPO
NPRE_BACPO   : ..........KGVLGDSKSFTTTASSSYQLKDTTRGNGIVTYTASNRQSIPGTLLTDADN...VWNDPAGVDAHAYAAKTYDYYKSKFGRNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAFSGDPDVVGHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ.....RKNWLVGDDIYTPNICGDALRSMSNPTLYDQPHHYSNLYKGSSDNGGVHTNSGIINKAYYLLAQGGTFHGVTVNGIGRDAAVQIYYSAFTNYLTSSSDFSNARAAVIQAAKDLYGANSAEATAAAKSFDAVG.. : DYR_CHICK

             : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301-------311--- :
OrigSeq      : ITGTSTVGVGRGVLGDQKNINTTYSTYYYLQDNTRGDGIFTYDAKYRTTLPGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAIRSSVHYSQGYNNAFWNGSEMVYGDGDGQTFIPLSGGIDVVAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGDSLRSMSDPAKYGDPDHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTHYGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVGVK :OrigSeq
cons         : -------------------EEE----EEEEE-------EEEEE-----------E-----------------------EEHHHHHHH------------EEEEEE--------------EEE------EEEE-----EEEEEEEEE--------EEEE-----HHHHHHHHHHHHHHHH------EEE--------------EE-------------------------EEE--------EEEEE------EEEEE--------HEEHHHHHEEE-----HHHHHHHHHHHHHHHH----HHHHHHHHHHHH---- :cons
dsc          : ----------EEEE------------EEEEE-------EEEEE---------EEE---------------HHHHH-------HHHHHH-----------EEEEEE--------------EEE------EEEE-------HHHHHHH--------EEEE-----HHHHHHHHHHHHHHH-------EEE------------HHHHH------------EEEE-------EEEE----HHHHHHHHH------EEEEE-----HHHHHHHHHHHEEE------HHHHHHHHHHHHHH-------HHHHHHHHHH---- :dsc
mul          : -------------------EE-------EEE-------EEEE--------------------------HHHH---H--EEEEE----------------EEEEEE-------------EEE----------------HEHHHHHHHHHH-----EEE------H---HHH---HHHH----------E--------------E--------------------------------------EEEE------------------HEEEEHH-EEEE---------HHHHHHHHH---------HHHHHHHH--H--- :mul
nnssp        : --------------------------EEEEE-------EEEEE-----------------------------------HHHHHHH--------------EEEEEE--------------EEE-------EE-----------------------EEEE-----HHHHHHHHHHHHHHHH--------------------------------------------------EEE--------EEEEE-----EEEEEE---------EEHHHHHH--------HHHHHHHHHHHHHHH-----HHHHHHHHHHH---- :nnssp
phd          : -------------------EEEE---EEEEEE------EEEEE-----------EE----------------------EEHHHHHHH-----------EEEEEEEE-----------EEEEEE-----EEEE-----EEEEEEEEEEEEE----EEEE----HHHHHHHHHHHHHHHHH------EEE--E-----------EE-------------------------EEE--------EEEEE--------EEE--E-----EEEEEEEEEEEEE---HHHHHHHHHHHHHHHH----HHHHHHHHHHHH---- :phd
pred         : ------------------EEEE-----EEEE--------EEE-----------------------------------EEEEE-----------------EEEEEE--------------EEE---------------EEE--------------------------HHHHHHHHHHEEE----------------------------------------------------------HHHHHHHH-----EEEEEE-----HHHHHHHHHHHH-------HHHHHHHHHHHHHHH----HHHHHHHHHHHH----- :pred
zpred        : -------------------EEE-----EEEE--------EE------------EEE------------HHHHHHHHEEEEEEEEE---------------EEEEEE-----EEE----EEEE------EEEE-----HHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHHH---------EEEE----------EEEEE-----------------------EEEEE----EEEEEEEE------------------EEEEEEEEEEEEE------HHHHHHHHHHE--------HHHHHHHHHHHEE-- :zpred


access       : EEEEBEEEBBEEBEEEEEEBEBBEBBBBBB-EEEEEEBBBBBEBEEEEEBBBBBBBEEEEEBBBBB-BBBBEBBBBBEBBBEBBEEBBEE-EBEEEEBEBBBBBBBBEE-E-BBBEBBEBBBBEEEEEEBBBBBBBBEBBBBEBBEBBBE-BBEBBBBB-EEBBEEBBBEBBBBBBEBBBEE--EBBBBEEBBBEE-EEEBBEBBEEEEEEEEEEEBBE--EBEEE-BBBBBBBEBBBEBBBBBBEEB--BBBBBBBBB-EEBBEBBBBBBBB-BEBEBEBEEB-BBBBEBBEEB-EEEEEBBBBBBEBBEBBEBE : access

PHD Rel      : 9982315557556587752465212116787535788457753256888876521225754555556654323222312225466530455566999747999860245543423553657735997624541378415578852125521442367516423457887878677534325766625523112578775321314687667997643335446887771232244432212354315985341231211233212466555688641465158999999999998158835588999777424679 : PHD Rel
Pred Rel     : 0066677889777779677587779978886799997769556777778998666689998777799767676666668555885666778899990666656667899987677999688889999777777788765667886665659766566779977757578888687750858999977779777789999966668999999999977777777879997678788976887767789988766676788776787777885655678966677799999999966699768788899887766000 : Predator Rel


dssp         : ---EEEEEEEE-----EEEEEEEE---EE-EE------EEEEE---------EE-EE---EE--HHHHHHHHHHHHHHHHHHHHHHHH-----------EEEEE--------EEE----EEE-------E--HHH-HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH------EE----E---------EE---HHHH-----HHH-----HHHHH----HHHHHHHHHHHHH-EEE--EEE----HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH----HHHHHHHHHHHH---- :dssp
define       : --EEEEEEEE----EEEEEEEEE---EEEEEEE----EEEEE-----------EEEE---------HHHHHHHHHHHHHHHHHHHHHHEEEE-----EEEEEEE--------------EEEEEE-----------HHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHH----EEEE-----------------------------------HHHHHH--HHHHHHHHHHHHHH-----EEEEEEEHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH--- :define
stride       : ---EEEEEEEE-----EEEEEEEE---EE-EE------EEEEE---------EE-EE---EE--HHHHHHHHHHHHHHHHHHHHHHHH-----------EEEEEEE------EEE----EEEE------E--HHH-HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH------EE----E---------EE---HHHH-----HHH------HHH-HHHHHHHHHHHHHHHHH-EEE--EEE----HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH----HHHHHHHHHHHHH--- :stride


Q3 values for 6tmne  View SS in Rasmol

	dssp	define	stride
phd	58.54	61.08	59.49
dsc	65.19	65.51	64.56
pred	63.92	66.46	62.34
mul	57.91	58.54	57.28
nnssp	60.76	62.34	60.13
zpred	58.54	57.59	59.18
cons	62.03	63.61	61.71