Results for 1cpn-1-DOMAK


1cpn-1-DOMAK    : FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNGSVFWEPKSYFNPSTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSS : S71224
S71224          : RTGSGFVSNDIYLHGFFSSSIKLPASAGVVIAFYLSNGDLYEKNHDEIDFEFLGGREWRIQTNIYGNGSTHLEERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTAPAKPMSLYSTIWDGWATDGGKYGVNYYAPYVSQFTDLILHGCAVMEIFRQKHMTYSYCYDHMRYKV.VLSEHRRGKHRSRSR.LARTESI.... : NRL_1GBG
NRL_1GBG        : FDCGENRSVQTYGYGLYEVNMKPAKNVGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDGQLKHTATTQIPQTPGKIMMNLWNGAGVDEWLGSYNGVTPLYAHYNWVRYTKR.................................................... : SYHA36M
SYHA36M         : FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSN.................................................... : ATU27609
ATU27609        : SSGSGFQSKNEYLFGKVSMQMKLVPSAGTVTTLYLKSPG...TTWDEIDFEFLGGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMEPNKPMRMYSSLWNAWATRGGLVKTDWKAPFTASYRGFQQEACVWMRWVQRNYMIYNYCTDAKRFPQGLPKE....................... : S49812
S49812          : ISGSGFQSKNEYLFGRFDMQLKLVPSAGTVTTFYLSSQG...AGHDEIDFEFLGGQPYTVHTNVYSQGKGNKEQQFRLWFDPTSPFHTYSIVWNSQRIIFLVDNIPIRVFNNHEPNQAMRVYASLWNAWATQGGRVKTDWMAPFTASYRNFNTNACVWLRWVQQKYMIYNYCADAKRFSQGLSPE....................... : HVXETPM5
HVXETPM5        : NGGSGFSSKDKYLYGEFSVQMKLIGSAGTVTSFYLTSGEG..DGHDEIDIEFMGGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQVDDVPVRTFKKYDPSQPMTVHATLWDGWATRHGDVKIDWQAPFVVNYRGYTSNGCVSVAWAESKYMSYDYCTDGWRFPNGFPAE....................... : ACTXET
ACTXET          : YTGTGFQSKGSYLFGHFSMQIKMVPSAGTVTAFYLSSQN...SEHDEIDFEFLGGQPYILQTNVFTGGKGDREQRIYLWFDPTKDYHSYSVLWNLYLIVFFVDDIPIRVFKNSKPDQPMKIYSSLWNAWATRGGLEKTDWKAPFVAAYKSFHIDGCEALRWVRSKYTIYNYCTDRTRYPT.MPPE....................... : S71222
S71222          : ASGSGFQTKKEYLFGKIDMQLKLVPSAGTVTAYYLKSKG...DTWDEIDFEFLGGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQPLQPMRLYSSLWNAWATRGGLVKTDWKAPFTASYRNFRADACVSMRVVQRKYMIYNYCTDTKRFPQGFPKE....................... : S61555
S61555          : SSGSGFQSKTEYLFGKIDMQIKLVPSAGTVTTFYLKSEG...STWDEIDFEFLGGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYEPNKPMRMYASLWNAWATRGGLVKTDWKAPFMASYRNIKIDSKPNLKWVQKNYMIYNYCTDHRRFPQGAPKE....................... : S71223
S71223          : YTGSGFISSNMYQHGFYSSMIKLPATAGVVVAFYTSNGDVFEKTHDELDIEFLGGKPWRFQTNLYGNGSTHREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDPAKPMALYATIWDAWATSGGKYKANYFAPFVAEFKSFSLDGCSVMRRFRQRFMYYSYCYDTLRYPE.PLPEERRRNRRQQRRPEIEIESDPDDR : ATXG
ATXG            : STGSGFKSLRPYRSGYFGASIKLQPTAGVDTSLYLSNNQEHPGDHDEVDIEFLGGKPYSLQTNVFVRGSGDREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNPTRPMWVYGSIWDAWATENGRIKADYYQPFVAKYKNFKLAGCTALTWAQRNFLVYNYCHDPKRDHT.QTPE....................... : S48102
S48102          : TSGSGFKSINRYRSGYFGANIKLQSTAGVITSFYLSNNQDYPGKHDEIDIEFLGGKPYTLQTNVFIEGSGDYEMRIHLWFDPTQDYHNYAIYWTPSEIIFFVDDVPIRRYPRKSPLRPLWVYGSVWDAWATENGKYKADYYQPFVGKYEDFKLGSCTVMEWVQKNYMVYNYCDDPTRDHT.LTPE....................... : JN0772
JN0772          : QITAGFTGGAGFTYPIFNHDPAITY.AAVADDLKVYVKPVNSSQWIDIDNNAASGWIYDQNFGQFTDGGGGYESIVKLESKTSSTNIVYTISFNPVRNSYVLTPYEGTTFTADAPDGGAPIGTELGNFQININGQVDLDNQSGFVYSANGYNNMSAANIGYPLNGQAGGSVGSNFVNYTLINPDALIWQDEFNGTALDQSKW...... : OXU56935
OXU56935        : FDGAAGSAPNPDVWNHETGAGGWGNLQNYTTSRVNSALDGQGNLVITALQESDGSARLTTQGNVQPQ.FGRIEARIQIPRGQGIWSAFWMVGANLPDTPWPTSG.EIDIMENVGPEVHGTVHGPGYSG.GIMGTYHPQGWFADDFHTFGIDWTPGEITNQWVFDQPFFLILNVAIGGQWPGNPDA....................... : A36910
A36910          : YSGGEFRTNNFYHYGYYECSMQAMKNDGVVSSFFTYTGPSDDNPWDEIDIEILGKNTTQVQFNYYTNGQGKHEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDGREVYRATQDIPKTPGKIMMNAWPGLTVDDWLKAFNGRTPLTAHYQWVTYNKNGVPW................................................ : EXOK_RHIME
EXOK_RHIME      : FACGEIQTRKRFGYGTYEARIKAADGSGLNSAFFTYIGPADKKPHDEIDFEVLGKNTAKVQINQYVSAKGGNEFLADVPGGANQGFNDYAFVWEKNRIRYYVNGELVHEVTDPAPVNAQKIFFSLWGT.TLTDWMGTFSYKEPTKLQVDRVAFTAAGDLERAQSE........................................... : GUB_CLOTM
GUB_CLOTM       : YKSGEYRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNPWDEIDIEFLGKDTTKVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTRNIPVTPGKIMMNLWPGIGVDEWLGRYDGRTPLQAEYEYVKYYPNGVPTIAPSTPTNPNLPLKGDVNGDGHVNSDVNRDGRIDSTDLTMLKRYLIRA : I40453
I40453          : YKAGELRTNDFYHYGLFEVSMKPAKSTGTVSSFFTYTGPWDWDPWDEIDIEFLGKDTTKIQFNYFTNGVGGNEHYHELGFDAADDFNTYAFEWRPESIRWFVNGELVHTATENIPQTPQKIMMNLWPGIGVDGWTGRFNGDTPVVTQYDWVKYTPLEENKYKKCKKTKVK...................................... : GUB_BACBR
GUB_BACBR       : YKAGELRTNDFYHYGLFEVSMKPAKVEGTVSSFFTYTGEWDWDPWDEIDIEFLGKDTTRIQFNYFTNGVGGNEFYYDLGFDASESFNTYAFEWREDSITWYVNGEAVHTATENIPQTPQKIMMNLWPGVGVDGWTGVFDGNTPVYSYYDWVRYTPLQN.................................................. : GUB_FIBSU
GUB_FIBSU       : FSGAELYTLEEVQYGKFEARMKMAAASGTVSSMFLYQNGSEIRPWVEVDIEVLGKNPGSFQSNIITGKAGAQEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTEGGQNTGTQGLRFNLWSS.ESAAWVGQFDEKLPLFQFINWVKVYKYTPGDWTFDGNRVDLTDKNIYSRDGMLILASAPASSSSVPASSSSVPASSSSA : YG46_YEAST
YG46_YEAST      : YDNPSLKSNFYIMYGKLEVILKAANGTGIVSSFYLQSDD.....LDEIDIEWVGGDNTQFQSNFFSKGDTTTDRGEFHGVDPTDKFHNYTLDWAMDKTTWYLDGESVRVLSNTSPQSPMYLMMGIWAGAGTIEWAGETNYDAPFTMYIEKVIVTDYSTYDQAQEDFAVLANGGSISSSSTSSSTVSSVSSTVSSSSSVSSSSSTSPSS : PHAA_SYNY4

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201----- :
OrigSeq         : FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNGSVFWEPKSYFNPSTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSS :OrigSeq
cons            : -----EE---EEEE-EEEEEEEE-----EEEEEEEE----------EEEEEEE----EEEEEEEEE-------EEEEEEE-------EEEEEE---EEEEEEE---EEEE---------EEEEEE---------EEEE------EEEEEEEEE----EEEEE----EEEEE------------------------------------- :cons
dsc             : -----EEEEEEEEE-EEEEEEEE----EEEEEEEEE----------EEEEEEE-----EEEEEEEE-------EEEEEEE-------EEEEEE----EEEEEE--EEEEEE--------EEEEEEE-----EEEEEEE------EEEEEEEEE-----EEEE-----EEEEEEEE--------EEEEE----------EEEEEEE--- :dsc
mul             : ----------------E-HHHHH-----EEEEEEE-----------HHHHHHH------EEEEE----------EEH-----------E--------EEEEE-----EE----------HHHHHH------------------EEE----E---------H----------------------------------------------- :mul
nnssp           : -----------EE--EEEEEE--------EEEEEE-----------EEEEEE-----EEEEEEEE---------EEEEE--------EEEEEE---EEEEEE----EEEE---------EEEEEE-------------------EE----EE-----EEEE-----EEE--------------------------------------- :nnssp
phd             : -----EE---EEEEEEEEEEEEE-----EEEEEEEE-----------EEEEEE----EEEEEEEEE-------EEEEEEE-------EEEEEE---EEEEEEE---EEEE---------EEEEEE----EE---EEEE-----EEEEEEEEEE----E-EEEE--EEEEEE------------------------------------- :phd
pred            : ----------------------------EEEEEEE-----------EEEEEE-------EEEEEE---------EEEE----------EEEE----EEEEEE------------------------------------------------EEE-----EEEE-----------------------------EEEEE------------ :pred
zpred           : ----------------HHHHHHH---EEEEEEEEE----------HHHHHHHH-----EEEEEEE-------EEEEE----------EEE-------EEEEEE---EEEE-------EEEEEEEE------------------EEEE------------------------------------------------------------- :zpred


access          : EEEEEBEBEEBBBBB-BEBBBEBBEEBBBBBBBBBBEEEEEEEE-EEBBBEBBEEEEBEB-BEBBBEEEEEEEBBBEBBBEBEEEBBBBBBBB-BE-BBBBBEEBEB-EBEEE-EEEBBEBBBBBBEBBBBEEB-BEBEBEBEBBBBBEBBEBBBBBBBEBBEEE-BBBBBB-EBEE-EEE-BEEBBEEEE-EEBEEEBEBEB-EEEE : access

PHD Rel         : 9887423151242135667777256885179999842688887665156765259624788876644999731346553247776326588833661899971871565335899998448766423441127212322576615797755533641111211212675423356668888995456667876777566453435699 : PHD Rel
Pred Rel        : 0097770787667666555567899986666888678999999996055565699997786677778999990755866899999876666669990690968876677779799999655555788988778988878998977850766667799756678799999997579888899876666696666666076657777000 : Predator Rel


dssp            : -EEEEEEE---E--EEEEEEEE------EEEEEEEEE--------EEEEEEEE-----EEEEEEEE--E----EEEE----HHH--EEEEEEEE--EEEEEE--EEEEEE--------EEEEEEEEEE---HHHH--------EEEEEEEEEEEE--EEEEE---------EEE---E-----E--EE-HHHEEE-----EEEEEE-- :dssp
define          : ---EEEE-EEEE--EEEEEEEEEEE------------------EEEEEEEE------EEEEEE----EEEEEEEEEE-------EEEEEEEEEE--EEEEE---EEEE-----EEEE--EEEEE-EEEEE--------------EEEEEEEEEEE--EEEEEE--------EEEEEE--------EEEE--EEEEE--EEEEEEE--- :define
stride          : -EEEEEEE---E--EEEEEEEE------EEEEEEEEE-HHH----EEEEEEEE-----EEEEEEEE--E----EEEE---------EEEEEEEE--EEEEEE--EEEEEE--------EEEEEEEEEE---HHHH--------EEEEEEEEEEEE--EEEEE---------EEE---EE----E--EE-HHHEEEE---EEEEEEE-- :stride


Q3 values for 1cpn-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	67.79	56.73	66.35
dsc	72.12	61.54	71.63
pred	62.02	54.81	61.54
mul	55.29	45.67	53.85
nnssp	67.79	58.17	66.35
zpred	59.62	47.60	58.17
cons	69.71	57.69	68.27