Results for 1dnpb-2-AUTO.1


1dnpb-2-AUTO.1    : SLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQKAGVTLDYPQPIVEHKEARVQTLAAYEAARK : AB003433
AB003433          : RFDRVEGNP.ICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQF.FHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESCIIGVDYPRPIVNHAETSRLNIERMKQIYQ : PHR_SALTY
PHR_SALTY         : ALCKHQPFR.WTKRVAWQENPHYFQAWQ.GETGYPIVDAAMRQLNATG.MHNRLRMITASFLVKDLLI.WRLGERYFMSQLIDGDLAAN.GGWQWAASTGTDAAPYFR.FNPTTQGERFDRDGEFIR.QLPALRDIPGKAIHEPWRWAK.AGVVLDYPRPIVEHKQAR.ATLSAYEAARK : PHR1_SINAL
PHR1_SINAL        : FTHEQ.SLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVELGTNYAKPIVVIDTARELLTKAISR... : PHR_YEAST
PHR_YEAST         : YTSMGMPYRLDTLDIKWENNPVAFEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGWGFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPELIS........SE..NKRPEN...YPKPLVDLKHSRERALKVYKDA.. : S57795
S57795            : FIHER.SLLGHLRACPWRIDQHAFKAWRQGQTGYPIVDAAMRQLWSSGWCHNRGRVVAASFLVKDLLLPWQWGLKHYWDAQIDADLECDALGWQYVSGGMSDAHPFSYMMDLEKEARRFDPDGEYVRRWLPALSRLPTEYIHAPWKAPASVELGCNYPLPIITRSDAKANVDYACGVLEK : S39058
S39058            : YSHER.PLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESIELGSNYPLPIVGLDEAKARLHEALSQMWQ : DROCPD1
DROCPD1           : NFDRMLGNV.YCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWIWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQY.FRVYSPVAFGKKTDPQGHYIRKYVPELSKYPATCIYEPWKASLVCVLGTDYPHRIVKHEVVHKENIKRMGAAYK : S74805
S74805            : NKLFN.RGGLLNKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARD.FRYFNIPKQSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATVQLGVDYPRPCVNFHQSVEARRKIEQMGVI : S74829
S74829            : ALAQG.PYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVASFLIKDLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKP.LRIFNPHTQAQKFDPEGEYIRTWLPQLAR..DTGDLLTGKLTPGSRRSVNYPEPIVDHNQ.QQREFKRRYQLV. : PHR_ANANI
PHR_ANANI         : SLADG.PYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKP.LRIFNPASQAKKFDATATYIKRWLPELRH..HPKDLISGEITPIERR..GYPAPIVNHNL.RQKQFKALYNQLK : PHR_STRGR
PHR_STRGR         : DASWS.DYR..PRHDRWRSDADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTKTLYVDWREGARHFLDLLVDGDVANNQLNWQWVAGTGTDTRP.NRVLNPVIQGKRFDARGDYVRGWVPELAEVE.SAIHEPWKLQG.DRAGLDYPDPVVDLAEARARFERARGL... : PHR_NEUCR
PHR_NEUCR         : YVCMNKPFKPTYSNIEWSYNVDHFHAWTQGRTGFPIIDAAMRQVLSTGYMHNRLRMIVASFLAKDLLVDWRMGERYFMEHLIDGDFASNNGGWGFAASVGVDPQPYFRVFNPLLQSEKFDPDGDYIRKWVEELRDLPDPYGRGSEKVKKKLEEK.GYPRPIVEHSGARDRALDAYKRGLA : PHR_BACFI
PHR_BACFI         : DCKDR.EIMEGYRELNWSHDQDDLTSWKRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTKDLLIDWRLGERYFERMLIDYDPSSNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYIRTYIPELNHVPDHYIHEPWKMSEECRLDEDYPLPIVDHSKQRKKALSFFKGDDE : PHR_HALHA
PHR_HALHA         : NVVSE.NFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAFLTKDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDADYITEFVPELRDVPAIHSWHELSLSERRRHAPEYPDPIVDHSQRREDAIAMFERARG : I40589

                  : 290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------- :
OrigSeq           : SLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQKAGVTLDYPQPIVEHKEARVQTLAAYEAARK :OrigSeq
cons              : --------------------HHHHHHHHH------HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH-----------EEEE----------EE--------------HHHHHHHHHHH-----------------------------HHHHHHHHHHHHHH--- :cons
dsc               : --------------------HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------EEEE--------------------------HHHHHHHHHHH------HH------------------HHHHH--HHHHHHHHHH--- :dsc
mul               : ----------------------HHHH---------EHHHHHHHHH----------EHHHHHHHHHHHH--------HHHHHHH-----------------------------------------------------------------------------EEEH--HHHHHHHHHHH--- :mul
nnssp             : EE------------------HHHHHHHH-------HHHHHHHHHHH------HHHHHHHHHHHH---------HHHHHHHHH------------EE---------------------------HHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHH :nnssp
phd               : --------------------HHHHHHHHH-----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH-----------EEEEE---------EE--------------HHHHHHHHHHHH-----------------------------HHHHHHHHHHHHH--- :phd
pred              : --------------------HHHHHHHH--------HHHHHHHHHH---HHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-----------EEEE--------EEEEE---------------HHHHH--------------------------------HHHHHHHHHHHHHHH--- :pred
zpred             : -----------------------HHHH------EEEEHHHHHHHH--------HEHHEEHHHHH--E-HHH-----HHHHHHHHHE------EEEEE-------------------EEE-----EEEEEE-----------------------------EEEEHHHHHHHHHHHHHH--- :zpred


access            : E-EEE-EB-BBBEEBEBEEEEE-BEBBEEE-EB-BBBEBBBEEBBBEBBB-B-BEBBBBBBBBEEBBBEBE-B-EBBBEBBBEBEBBBEBEBBBBBBBEB-EB-EBB-BBBB-EEBEE-EEEBE-B-EBBEEBEEBEEEBB--B-EBEEEBEBB-E-B-BBBEBEEBEEEBBEBBEEB-E : access

PHD Rel           : 977667776443456544455899888652779615799999999731365478999998985433211145468999998334321135762578634568664221215665553369641126998678653799643466665553212689998644411568999999974179 : PHD Rel
Pred Rel          : 008899998880868079976778887877999776688890999777778887899787886868775577779897677677776809997688679999898066609998899509997655730788988809070799997778765669999866678879999997777000 : Predator Rel


dssp              : HHHH-----HHHHH------HHHHHHHHH-----HHHHHHHHHHHHH----HHHHHHHHHHHHH-----HHHHHHHHHHH-----HHHHHHHHHHH---------------HHHHHHHH----HHHHHH-HHH----------HHHHHHHH------------HHHHHHHHHHHHHHHH- :dssp
define            : HHHH----HHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHHH---HHHHHHHHHHHHHH----HHHHHHHHHHHHH---HHHHHHHHHHHHHH---------EEEEHHHHHHHHH--HHHHHHHH------------HHHHHHHHHHEEEEEEEE--HHHHHHHHHHHHHHHHHH :define
stride            : HHH------HHHHH------HHHHHHHHH-----HHHHHHHHHHHHH----HHHHHHHHHHHHHHH---HHHHHHHHHH------HHHHHHHHHHHH--------------HHHHHHHHH---HHHHHH-HHH----------HHHHHHHH------------HHHHHHHHHHHHHHHH- :stride


Q3 values for 1dnpb-2-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	68.89	57.78	69.44
dsc	67.22	55.00	67.78
pred	65.00	58.33	65.56
mul	55.56	42.22	55.56
nnssp	72.78	57.78	70.56
zpred	55.00	46.67	53.33
cons	70.00	58.33	70.56