Results for 1hiws-1-AS


1hiws-1-AS    : VLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQN : HIV1IGNC
HIV1IGNC      : ILSGGKLDAWERIRLRPGGKKHYKMKHLVWASREMERFALNPGLLETAEGCQQAMGQIQPALQTGTEELRSLYNTIATIYCVXQKIEVRDTKEALEEVEKRQK : HIVG109
HIVG109       : VLSGGQLDAWERIRLRPGGKKKYQLKHIVWASRELERFALNPGLLETAEGCKQIIEQLHPNLQSGSEDLKSLYNTVATLYCVHNRIEVKDTKEALEKMEEEQN : HIVU86564
HIVU86564     : .................GGKKQYKLKHIVWASRELERFALNPGLLETSEGCRQLLGQLQPSLQTGSEEVKSLYNTVATLYCVHQNIDVRDTKEALDKIEEEQD : HIV1ZAM18
HIV1ZAM18     : ILKGGKLDTWEKIRLRPGGKKHYMIKHLVWASRELERFALNPGLLETSEGCKQIIKQLQPSIQTGTEELKSLFNTVVTLWCVHEDITVRDTKEALDRLEEEQN : HIV1OSAMT
HIV1OSAMT     : VLSGGKLDAWEKIRLRPGGKKQYKMKHLVWASRELERFAINPGLLETAEGCLDIIEQLQPTLKTGSEELQSVYNLVTTLFCVHQRIDVKDTKEALEEVEKVRK : HIVU43172
HIVU43172     : ILSGGKLDAWKRIRLRPGGKKKYQIKHIVWASRKLEKFALNPGLLKTAEGCQQIMEQLQSALKTGSEELKSLFNTVATLYCVHQKINVKDTKEALDKIEEIQN : HIV1U29403
HIV1U29403    : VLSGGELDRWEKIRLRPGGKKKYQLKHIVLASRELERFAVNPGLLETSDGCRQILGQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALEKIEEEQN : HIVDJ258
HIVDJ258      : VLSGGKLDSWEKIRLRPGGKKKYRLKHLVWASRELERFALNPGLLETAEGCQQLMEQLQSALGTESKELKSLYNTIAVLWCVHQRIDIKDTKEALDKIEAVQN : HIV1HARMN
HIV1HARMN     : VLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTVATLYCVHQKIEVXDTKEALEKVEEEQN : HIVG141
HIVG141       : VLSGGKLDDWEKIQLRPGGTKRYKLKHIVWASRELERFALDPSLLETSEGCKQILGQLQPALKTGSEELKSLYNTVATLYCVHARIEIKDTKEALDKIEEIQN : HIV1LINC
HIV1LINC      : VLSGGXLDKWEKIRLRPGXKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLRTGSEELKSLFNAVAVLYCVHQGIEVRDTKEALEKIEEEQN : HIVVI325
HIVVI325      : VLSGGKLDTWEKIRLRPGGSKKYRLKHLVWASRELERFALNPSLLETTEGCRQIIRQLQPSLQTGSEELKSLFNTVVTLYCVHQRIEIRDTKEALDKLEEEQN : GAG_HV1U4
GAG_HV1U4     : VLSGKKLDSWEKIRLRPGGNKKYRLKHLVWASRELEKFTLNPGLLETAEGCQQILGQLQPALQTGTEELRSLYNTVAVLYCVHQRIDVKDTKEALNKIEEMQN : HIVVI525
HIVVI525      : VLSGGRLDAWEKIRLRPGGKKQYRLKHLVWASRELERFALNPGLLETSEGCLQIIEQLQPALKTGTEELQSLFNLLAVLYCVHQRIDIKDTKEALSKIEEVQN : HIVDJ259
HIVDJ259      : ILRGEKLDAWEKIKLRPGGRKRYMLKHLVWASRELEKFALNPSLLETSEGCKQIIRQLQPALQTGTEELRSLYNTVATLYCVHARIEIQDTKEALDKIEEEQN : HIVU86551
HIVU86551     : .................GGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLYNTVAVLFCVHQKIEVRDTKEALEKIEEEQN : NOTC_DROME

              : 7---------17--------27--------37--------47--------57--------67--------77--------87--------97--------107 :
OrigSeq       : VLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQN :OrigSeq
cons          : --------HHHHHHE------EEEEEEHHHHHHHHHHHH---------HHHHHHHHHHHHH----HHHHHHHHHHEEEEEE---EEE--HHHHHHHHHHHH-- :cons
dsc           : ------HHHHHEEEE------EEEEEEEEHHHHHHHHH------------HHHHHH----------HHHHHH---EEEEEE---EEE---HHHHHHHHHH--- :dsc
mul           : -----------HH----------HHEEEHHHHHHHHHHH------H-----HHHHHHH--------HHHHHHHH-EEEEEEEHHHHHHHHHHHHHHHHHHHH- :mul
nnssp         : EE------HHHHHEE------EEEHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH :nnssp
phd           : --------HHHHHHH-------EEEEEHHHHHHHHHHHH-----E---HHHHHHHHHHHHH----HHHHHHHHHHEEEEEEEE-EEE--HHHHHHHHHHHH-- :phd
pred          : -------HHHHHHH--------HHHHHHHHHHHHHHHHH-----------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHH-EEEE---HHHHHHHHH--- :pred
zpred         : E-------HHH---------HHEEEEEEHHHHHHHHHHH-----HHHHHHHHHEEEEE--------HHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHH :zpred


access        : E-EEEEBEEBEEBEB-EEEEEE-EBEBBBBBBEEBEEBBB-EEBBEBBEEBEEBBEEB-EBBEEBEEEBEEBBBBBBBBBBBBB-BEBEEBEEBBEEBEEEEE : access

PHD Rel       : 9899966278899865888721567422467999999542887510443389999999643126628999997541254444235661116899999999369 : PHD Rel
Pred Rel      : 0009987570770000900907088877698799977760900060570009979980666779977709909888797785805055576599997777000 : Predator Rel


dssp          : -----HHHHH---E-------E---HHHHHHHHHHHH--E-HHH---HHHHHHHHHHHHHH---E-HHHHHHHHHHHHHHHHH------EHHHHHHHHHHHH- :dssp
define        : --HHHHHHHHHHH------EEEEHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHH :define
stride        : ----HHHHHHH--E-------E--HHHHHHHHHHHHHH-E-------HHHHHHHHHHHHHH---E-HHHHHHHHHHHHHHHHHH-----EHHHHHHHHHHHH- :stride


Q3 values for 1hiws-1-AS  View SS in Rasmol

	dssp	define	stride
phd	64.08	67.96	66.99
dsc	58.25	58.25	61.17
pred	72.82	76.70	76.70
mul	57.28	63.11	61.17
nnssp	71.84	73.79	75.73
zpred	54.37	63.11	59.22
cons	66.02	69.90	68.93