Results for 1scud-1-AS


1scud-1-AS    : SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGP : RPRBFA4
RPRBFA4       : AILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRALIG.STRLIGP : SUCD_HAEIN
SUCD_HAEIN    : AILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVENTGVTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNETGVVMIGP : SUCA_RAT
SUCA_RAT      : NIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGKKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMLRVKHKLTRQGTRLIGP : SCA1_TRIVA
SCA1_TRIVA    : LLFIDKDTKVVIQGIGN.QGQFHSRLMRQYGTKVVGAVHPKKAGTIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGCQLIGP : SUCD_THEFL
SUCD_THEFL    : MILVNRETRVLVQGITGREGQFHTKQMLDYGTKIVAGVTPGKGGTEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGG : SUCA_YEAST
SUCA_YEAST    : NLLLPKDTKVIFQGFTGKQGTFHASISQEYGTNVVGGTNPKKAGQTHLGQPVFASVKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDTRLVGP : MTKB_METEX
MTKB_METEX    : SILIDEKTPILVQGITGDKGTFHAKEMIAYGSNVVGGVTPGKGGKTHCGVPVFNTVKEAVEATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRYPTMVVGP : E64455
E64455        : MILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGP : SUCD_COXBU
SUCD_COXBU    : SILIDKETRVLCQGFTGKQGTFHSEQAIEYGTQMVGGVTPGKGGQSHLGLPIFNSVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQHPVRMIGP : SUCA_ARATH
SUCA_ARATH    : QVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQSTRLIGP : CELF23H111
CELF23H111    : NLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLVGGVSPNKAGQTHLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQNSRLLGP : SUCA_CAEEL
SUCA_CAEEL    : NLKINKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKNVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQNTRLVGP : MTCY10D721
MTCY10D721    : SIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGTRIIGP : S75921
S75921        : .MKWHKESKVLLQGVHHPLGLTYLEQMRSCGTKLVAGVSPGHGGELIGDLPVFDLVDLAVKTVGVDISLILNPPYRVLDAALEAIAAGIRQLVIVSAGVPPLDMITLLREAQATHTLILGS : DRODFUR2X

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------1 :
OrigSeq       : SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGP :OrigSeq
cons          : -EEE---EEEEEE---------HHHHHHH---EEEEEE--------EEE----HHHHHHHHH----EEEEE-----HHHHHHHHHHH--EEEEEEE-----HHHHHHHHHHHH--EEEE-- :cons
dsc           : --------EEEEE-----------HHHHH---EEEEEE--------EEE---HHHHHHHHH-----EEEEE-----HHHHHHHHHH---EEEEEE------HHHHHHHHHHH---EEE--- :dsc
mul           : -EHH----EEEEEE------------HHH---EEEEE---------------EHHHHHHHHH-----EEEEE----HHHHHHHHHHHHHHEEEEEE-------HHHHHHHHH----EEE-- :mul
nnssp         : EEEE----EEEEE-----------HHHHH---EEEE-------------------HHHHHH------EEEEE----HHHHHHHHHH----EEEEE--------HHHHHHHHHH---EEE-- :nnssp
phd           : -EEEE--EEEEEEEE------EHHHHHHH---EEEEEE------EEEEE----EEHHHHHHH----EEEEE---HHHHHHHHHHHHH--EEEEEEE----HHHHHHHHHHHHH--EEEE-- :phd
pred          : -------EEEEEE---------HHHHHHHH--EEE------------------HHHHHHHHH----EEEEE-----HHHHHHHHHHH---EEEEEE------HHHHHHHHHH--------- :pred
zpred         : HHHHH---EEEEEEE----------HHH---EEEEEEE-----EEEEEEEEEEHHHHHHHHHHHHHEEEEEEE--HHHHHHHHHHHHHHHHEEEEE---HHHHHHHHHHHHH---EEEEE- :zpred


access        : EBBBEEEBEBBBEBBEBEEB-BBBEEBBEBBBEBBBBB-EEEEBEEBBBBEBBEBBEEBBEEEEBEBBBBBBBBEBBBEBBBEBBEBEBEBBBBBBEBBE-BEBBEBEBEBEEEBBEBBEE : access

PHD Rel       : 9477714479998624776511356577327416888538998858651332111578898449754899618814599999999718548999716987267999999887436155529 : PHD Rel
Pred Rel      : 0050999889099789990966656678866608966989999976760786665589977779966900079987688999999766658099867999876577898877677655000 : Predator Rel


dssp          : --------EEEEE----HHHHHHHHHHHH---EEEEEE------EEE--EEEE--HHHHHHHH---EEEE---HHHHHHHHHHHHHH---EEEE------HHHHHHHHHHHHHH--EEE-- :dssp
define        : -------EEEE------HHHHHHHHHHHHHH-----------------EEEEEEHHHHHHHHHHEEEEEEE----HHHHHHHHHHHHH-EEEEEEEE--HHHHHHHHHHHHHHHEEEEE-- :define
stride        : ---------EEEE----HHHHHHHHHHHHH---EEEEE------EEE--EEEE--HHHHHHH----EEEE---HHHHHHHHHHHHHH---EEEE------HHHHHHHHHHHHHH--EEE-- :stride


Q3 values for 1scud-1-AS  View SS in Rasmol

	dssp	define	stride
phd	76.86	66.94	75.21
dsc	74.38	66.12	72.73
pred	72.73	71.07	72.73
mul	67.77	61.98	66.12
nnssp	71.90	61.16	70.25
zpred	66.12	61.98	62.81
cons	75.21	70.25	73.55