Results for 1vokb-1-AS


1vokb-1-AS    : VDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQ : TF2D_SPOFR
TF2D_SPOFR    : TPHSADP.GIVPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKK.. : TF2D_ACACA
TF2D_ACACA    : VDRTKHPSGIVPTLQNIVSTVNLGCKLDLKNIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEEASRLAARKYARIIQKLGFAAKFLDFKIQNIVGSCDVRFPIRLEGLAFAHNHYCSYEPELFPGLIYRMVQPKIVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLTEYKKT. : SPU86586
SPU86586      : TPASSESSGIVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKREDNSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSFKKTS : PCU14410
PCU14410      : TNTFAGVSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEFRKSS : TF21_WHEAT
TF21_WHEAT    : VDLARHPSGIVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEYRKSQ : A54275
A54275        : ...MVDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGAKSVQDIERAVAKLAQKLKSIGKFKRAPQIDVQNMVFSGDIGREFNLDVVALT.LPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKYGLLE : SABAPG
SABAPG        : IIPDEIPYKAVVNIENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKYGQLTGKPKIQIQNIVASANLHVIVNLDKAAFL.LENNMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVELDCVK : ONGTBP
ONGTBP        : VPS........PALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGFKK.. : YSCTFIID
YSCTFIID      : EKDTSATSGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM. : TF2D_PLAFA
TF2D_PLAFA    : LKNKLVHKNISLNIHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLIIRLNKPQCTALIFKNGRIMLTGTRTKKDSIMGCKKIAKIIKIVTDKVKFCNFKIENIIASANCNIPIRLEVLAHDHKEYCNYEPELFAGLVYRYKPTKSVILIFVSGKIIITGCKSVNKLYTVFQDIYNVLIQYKN.. : TF2D_ENTHI
TF2D_ENTHI    : KKVLIIQTITHPEIVNVVSRFQLGVKLELRKIVQKAINAIYNPKRFAGAIMRISSPKSTALIFQTGKIVCTGTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSDLAFCQYEPEVFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANRKED : S37740
S37740        : ALVEPKDAQHEIRLQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFRKT. : S41473
S41473        : TMDKSISEDLYPKLQNIVSTVNLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMVCTGAKTEEDSNRAARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKFVQYEPEIFPGKIYREFNTKIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQKKD : TF2D_DICDI
TF2D_DICDI    : VDLSKHPSGIIPTLQNIVSTVNMATELYLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKMVCTGAKSEDASRFAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTSFTNYEPEIFPGLIYKMIQPKVLLLIFVSGKIVLTGAKVREYIYEAFENIYPVLSAFKKVN : HSTBP1
HSTBP1        : ....MSTLADTIHIENVVASSDLGQELALDQLSTDLPGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVCTGAKSVDDVHEALGIVFGDIRELGDVTSNPPIEVQNIVSSASLEQSLNLNAIAIGGLEQIEYEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGGQNPDEAEQALAHVQDRLTELGLLD : C64363
C64363        : ....MKIMEPEIKIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTGAKSKEEAEIAIKKIIKELKDAGDVIENPEIKIQNMVATADLGIEPNLDDIAL.MVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEVQEL. : UNG_HSVSA

              : 12--------22--------32--------42--------52--------62--------72--------82--------92--------102-------112-------122-------132-------142-------152-------162-------172-------182-------192----- :
OrigSeq       : VDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQ :OrigSeq
cons          : ------------HHHEEEEEE-----HHHHHHHHHHHH-----HHHHHHEEEH----EEEEEE----EEEE-----HHHHHHHHHHHHHHHHH----------E--EEE---------HHHHHH---------------EEEEE----EEEEEEE--EEEEE----HHHHHHHHHHHHHHHHHHH--- :cons
dsc           : -----------EEEEEEEEEEE-----HHHHHHHHHH------HHHHHEEEE------EEEEE----EEEE-----HHHHHHHHHHHHHHHH--------------------------HHHHHH-----------------HH-----EEEEEEE--EEEEE-----HHHHHHHHHHHHHHHHH---- :dsc
mul           : -----------E---EEEEEEE---H-HHHHHHHHH---------HHHHEE-H------EEEE----EEEE--H----HHHHHHHHHH-EHH----HH--H-H---EE-----EEEEHHHHHHH-----------HH--HHEE-----EEEEEEH--EEEEE--HHHHHHHHHHHHHHHHHHHH---- :mul
nnssp         : ------------HHHHHHHHH-------HHHHHHHHH------HHHHHHHHHH-----EEEEEE---EEEE----HHHHHHHHHHHHHHHHHH---------EE--EE----------HHHHHH---------------EEE------EEEEEEE---EEEE----HHHHHHHHHHHHHHHHHHHH-- :nnssp
phd           : ------------HHHEEEEEE-----HHHHHHHHHHHH-----HHHHHHEEEEE---EEEEEE---EEEEE-----HHHHHHHHHHHHHHHHH----------EEEEEEEE---EEEEE--------------------EEEEEE---EEEEEE---EEEEE----HHHHHHHHHHHHHHHHHHH--- :phd
pred          : ---------------EEEEEE---HHHHHHHHHHHHHH------HHHHHHHHH----EEEEEE------------HHHHHHHHHHHHHHHHHH-------------EEE------HHHHHHHHH---------------EEEEE----EEEEEE----EEEEE--HHHHHHHHHHHHHH--------- :pred
zpred         : ------------EEEEEEEEEE-HHHHHHHHHHHH---------HHHHEEEEE----HHEEEHH--EEEEEHHHHHHHHHHHHHHHHHEEEE-------HHHHEEEEEEEEEEEEEEHHHHHH---------EHHHHHHHHEEE---EEEEEEEHEEEEEEEHH--HHHHHHHHHHEEHHHHHH---- :zpred


access        : EEEEEEBEEBBBEBEBBBBBBEBBBEBEBEEBBBEBEEBE--EEEBBBBBB-BEEEEBBBBBBBBBEBBBEBBEEEEEBEEBBEEBBEBBEEBEBEBEB-EBEBEBBBBBBEBEBBB-BEBBBBBBBEBBE-EEEBBEEBBBEBBEEEBBBBBBBBBEBBBBBBEB-EEB-EBBEEBBEBBEEBEEEE : access

PHD Rel       : 99788888854223214565224531138999997420235815455621225457816788645848883688842689999999999999556422033212223654212111122121113454446763144662688848648999933646887268773899999999999999731279 : PHD Rel
Pred Rel      : 00880099076687866666567766589899999556888099088897066099666700568980076887788899999999999999698877677555556658678866555667687788677088997770909689906999956996990077678899999998588886777000 : Predator Rel


dssp          : ------------EEEEEEEEEE------HHHHHHH---EEEE---EEEEEEEEE--EEEEEE----EEEEEEE--HHHHHHHHHHHHHHHHH-------EEEEEEEEEEEEE----E-HHHHHHH----EEE-------EEEEE----EEEEE----EEEEEEE--HHHHHHHHHHHHHHHHH-E--- :dssp
define        : --------EEEEEE-EEEEEEEE-EEEEHHHHHHHH-----------EEEEEE----EEEEEE--EEEEEE---HHHHHHHHHHHHHHHHHHHH---EEEEEEE-EEEE----EEEEEHHHHHHHHH-EEEEE-----EEEEEE----EEEEEE--EEEEEEEE-HHHHHHHHHHHHHHHHHHHH--- :define
stride        : ------------EEEEEEEEEE------HHHHHHH---EEEE---EEEEEEEE----EEEEEE---EEEEEEE--HHHHHHHHHHHHHHHHHH------EEEEEEEEEEEEE----E-HHHHHHH----EEE-------EEEEE----EEEEE----EEEEEEE--HHHHHHHHHHHHHHHHHHE--- :stride


Q3 values for 1vokb-1-AS  View SS in Rasmol

	dssp	define	stride
phd	73.94	70.21	75.53
dsc	72.34	68.09	73.94
pred	67.55	67.02	69.15
mul	65.43	68.09	67.02
nnssp	68.62	64.89	71.28
zpred	67.55	64.36	68.62
cons	74.47	71.81	77.13