Predictions for request ./t0005



T0005: gamma fibrinogen C terminal part   : VQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV : T0005: gamma fibrinogen C terminal part  
FIBG_XENLA                                : VQIQEFTGKDCQEVANKGARLSGLYYIKPLKAKQQFLVYCEIEPSGSAWTVIQRRLDGSVNFHKNWVQYREGFGYLSPNDKTEFWLGNEKIHLLSTQSTIPYVMRIELEDWSNQKSTADYSTFRLGSEKDNYRFTYAYFIGGDAGDAFDGFDFGDDPSDKFYTSHNGMQFSTFDKDNDKFDGNCAEQDGSGWWMNRCHAAHLNGKYYQGGTYSEASGPSGYDNGIIWATWRRRWYSMKSVTMKIMPLNRYGAE.GQ.QTLGGSKKSDFE : FIBG_XENLA  
D63155S6                                  : GEPCLTGPRTCKDLLDRGHFLSGWHTIYLP.DCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRL....GEFWLGNDNIHALTA..QGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLT............F..HNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGT.......HGSFANGINWKSGKGYNYSYKVSEMKVRPA...................... : D63155S6  
TENA_CHICK                                : TTTLYPYPKDCSQALLNGEVTSGLYTIYLNGRTQPLQVFCDMAEDGGGWIVFLRRQNGKEDFYRNWKNYVAGFGDPK....DEFWIGLENLHKISS..QGQYELRVDLRDRGE.TAYAVYDKFSVGDAKTRYRLRVDGY.SGTAGDSMT............Y..HNGRSFSTFDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYGD..........NNHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGR..RKR......... : TENA_CHICK  
FIBG_RAT                                  : VRIYDITGKDCQDTANKGAKESGLYSIRPLKATEQFLVYCETDGPGNGWTEFKKRLDGSVDFLKNWIQYKEGFGHLSPTGTTEFWLGNEKNHLISMQSTIPYALRIQLKDWSGRTSTADYAMFRVGPESDKYRLTYAYFIGGDAGDAFDGYDFGDDPSDKFFTSHNGMHFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKSSTPNGYDNGIIWATWKTRWYSMKETTMKIIPFNRLSIGDGQQHHMGGSKQVSVE : FIBG_RAT  
B47172                                    : GQLCATGPRTCKELLTRGHFLSGWHTIYLP.DCQPLTVLCDMDTDGGGWTVFQRRSDGSVDFYRDWAAYKRGFGSQL....GEFWLGNDHIHALTA..QGTSELRVDLVDFEGNHQFAKYRSFQVAGEAEKYKLVLGGFLEGNAGDSLS............S..HRDQFFSTKDQDNDNHSGNCAEQYHGAWWYNACHSSNLNGRYLRGL.......HTSYANGVNWRSGRGYNYSYQVSEMKVRLT...................... : B47172  
FIBA_RAT                                  : ...RARTMRDCDDVLQTSGAQNGIFSIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDKGEGEFWLGNDYLHLLTLR...GSVLRVELEDWAGKEAYAEY.HFRVGSEAEGYALQVSSYQG.TAGDALMEGSVEEG...TEYTSHSNMQFSTFDRDADQWEENCAEVYGGGWWYNSCQAANLNGIYYPGGTYDPRNSPYEIENGVLWVPFRGADYSLWAVRMKIRPLVG.................... : FIBA_RAT  
FIBX_MOUSE                                : QSQQHLIYKDCSDHYVLGRRSSGAYRVTPDHN.SSFEVYCDMETMGGGWTVLQARLDGSTNFTREWKDYKAGFGNLER....EFWLGNDKIHLLTKS..KEMILRIDLEDFNGLTLYALYDQFYVANEFLKYRLHIGNYNG.TAGDALRFSR.........HYNHDLRFFTTPDRDNDRYPSGCGLYYSSGWWFDSCLSANLNGKYYHQK.......YKGVRNGIFWGTWPGYKSSFKQAKMMIRPKNFK................... : FIBX_MOUSE  
AF004327                                  : TVAEQISFRDCAEVFKSGHTTNGIYTLTFPNSTEEIKAYCDMEAGGGGWTIIQRREDGSVDFQRTWKEYKVGFGNPS....GEYWLGNEFVSQLTNQQ..RYVLKIHLKDWEGNEAYSLYEHFYLSSEELNYRIHLKGLTG.TAGKISS............ISQPGN.DFSTKDGDNDKCICKCSQMLTGGWWFDACGPSNLNGMYYPQR......QNTNKFNGIKWYYWKGSGYSLKATTMMIRPAD..................... : AF004327  
FIBB_BOVIN                                : CNIPVVSGKECEKIIRNEGETSEMYLIQPEDSSKPYRVYCDMKTEKGGWTVIQNRQDGSVDFGRKWDPYKQGFGNIATNAPGEYWLGNDRISQLTNMG..PTKLLIEMEDWKGDKVTALYEGFTVQNEANKYQLSVSKYKG.TAGNALIEGASQLVGENRTMTIHNSMFFSTYDRDNDGWKTTCSKEDGGGWWYNRCHAANPNGRYYWGGAYTWDMAKHGTDDGVVWMNWQGSWYSMKKMSMKIRPYFPE................... : FIBB_BOVIN  
JH0675                                    : TTGVFANPQDCAQHLMNGDTLSGVYTISINGLSQRVQVFCDMSTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNLE....DEFWLGLDNIHKITS..QGRYELRIDMRDGQE.AAYAYYDKFSVGDSRSLYKLRIGDY.NGTSGDSLT............Y..HQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGE..........SRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGR..KRRSLQ...... : JH0675  
RNU24489                                  : .....................SKTTTIFLNGRERPLDVFCDMQTDGGGWLVFQRRMDGQTDFWRDWEEYAHGFGNIS....REFWLGNEALHSLTQ..AGDYSMRVDLRAGKE.AVFAQYDFFRVDSAKENYRLHLGGY.HGTAGDSMS............Y..HSGSAFSARDRDPNNLLISCAVSYRGAWWYRDCHYANLNGLYGS..........TVDHQGVSWYHWKGFEFSVPFTEMKLRPRNFQAPTRGT............. : RNU24489  
MMU83509                                  : GKREEKPFRDCADVYQAGFNKSGIYTIYFNNMPEPKKVFCNMDVNGGGWTVIQHREDGSLDFQRGWKEYKMGFGNPS....GEYWLGNEFIFAITSQR..QYMLRIELMDWEGNRAYSQYDRFHIGNEKQNYRLYLKGHTG.TAGKQSS............LILHGA.DFSTKDADNDNCMCKCALMLTGGWWFDACGPSNLNGMFYTAG......QNHGKLNGIKWHYFKGPSYSLRSTTMMIRPLD..................... : MMU83509  
FIBA_PARPA                                : KRISPEYPRDCYDILQSQSPPSGQYYIQPDG.GNLIKVYCDMETDEGGWTVFQRRIDGTINFYRSWSYYQTGFGNLN....TEFWLGNDNIHYLTSQ..GDYELRVELNNTLGNHYYAKYNKFRIGDSFSEYLLVLGAYSG.TAGDSLAY..............HNTMRFSTYDNDNDVYSINCASHSRGAWWYKSCLLSNLNGQYYD..........YSGAPSIYWSYLPGDNDQIPFAEMKLRNRSI.................... : FIBA_PARPA  
MFA4_HUMAN                                : ALECLQQPLDCDDIYAQGYQSDGVYLIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRAD....GEYWLGLQNMHLLTL..KQKYELRVDLEDFENNTAYAKYADFSISPEEDGYTLFVAGFEDGGAGDSLS............Y..HSGQKFSTFDRDQDLFVQNCAALSSGAFWFRSCHFANLNGFYLGGS.......HLSYANGINWAQWKGFYYSLKRTEMKIRRA...................... : MFA4_HUMAN  
GGTNY                                     : DTPPHPHPRDCAEEQLNGPGPSREVLIFLGGRQRPLHVFCDMESNGGGWLVFQRRMDGGTDFWRGWEEYVHGFGNVS....GEFWLGNAALHTLTA..SGPTELRVDLRTPSD.SAFARYRDFAVSGPEDNFRLHLGAY.SGTAGDALS............Y..HAGSPFSTRDHDPRGRPRPCAVAYTGAWWYRNCHYANLNGRYGV..........PYDHQGINWYPWKGFEYSIPFTEMKLRPQ...R.................. : GGTNY  
DRTENASCN                                 : LTILYKHPKDCSQALLNGDTTSGFYTIYLRGESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLN....DEFWLGLSNLHKITS..FGQYELRVDLRDKGE.SAYAQYDKFSISEPRARYKVHVGGY.SGTAGDSMT............Y..HHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNIMGRYGD..........NSHSKGVNWFHWKGHEHSVEFAEMKIRPANFRNFEGR..KKR......... : DRTENASCN  
HS1141O191                                : STVRFPHPSDCSQVQQNSNAASGLYTIYLHGASRPLQVYCDMETDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPM....KEFWLGLDKLHNLTTGTPARYEVRVDLQTANE.SAYAIYDFFQVASSKERYKLTVGKY.RGTAGDALT............Y..HNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGE..........TKHSEGVNWEPWKGHEFSIPYVELKIRPHG..................... : HS1141O191  
DRTENASCW                                 : STVAYQFPDGLYSDHEEWEHGEWRVHIYVNNRSRTMQVYCDMKTDGGGWIVFQRRNTGKVDFMKKWRDYMKGFGELT....EEFWLGLDKIHELTN.TPTQYEARFDLGSGSD.RKYAVYDNFKVAPSKQKFKLTIGSY.KGNAGDAMT............Y..HQGAPFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGRFGD..........NRHSMGVNWEPWKGHLQSLDFAEIKIRPVGAAGRQKRSLKRRVTA...... : DRTENASCW  
FIBG_PETMA                                : NKISPITGKDCQQVVDNGGKDSGLYYIKPLKAKQPFLVFCEIE.NGNGWTVIQHRHDGSVNFTRDWVSYREGFGYLAPTLTTEFWLGNEKIHLLTGQ..QAYRLRIDLTDWENTHRYADYGHFKLTPESDEYRLFYSMYLDGDAGNAFDGFDFGDDPQDKFYTTHLGMLFSTPERDNDKYEGSCAEQDGSGWWMNRCHAGHLNGKYYFGGNYRKTDVEFPYDDGIIWATWHDRWYSLKMTTMKLLPMGRDLSGHGGQQQSKGNSRGD.. : FIBG_PETMA  
FIB2_PETMA                                : ....LSEYIDCLDVLQRGGKASGLYEVRPRGAKRALTVHCEQDTDGGGWTLVQQREDGSLNFNRSFSAYREGFGTVDGSGHGELWLGLEAMYLLAHE...DSTMRVELQGWDGAGAHAEY.TVTLRDDSKGYALQVSDYRG.TAGNALVSGVADD....PELTSHGGMTFSTYDRDTDKWSDGCAEWYGGGWWINACQAANLNGVYYQGGPYDPRKPPYEVENGVVWATYRGSDYSLKRTAVRFRRVQIPIV................. : FIB2_PETMA  
FIBA_CHICK                                : STRRSYNGKDCDDIRQKSGAKSGIFKIKPEGSNKVLSVYCDQETTLGGWLLIQQRMDGSVNFNRTWQDYRRGFGSVDGKGQGELWLGNENIHLLTQN...DTLLRVELEDWDGNAAYAEY.IVQVGTEAEGYALTVSSYEG.TAGDALVAGWLEEG...SEYTSHAQMQFSTFDRDQDHWEESCAEVYGGGWWYNSCQAANLNGIYYPGGHYDPRNVPYEIENGVVWIPFRASDYSLKVVRMKIRPLET.................... : FIBA_CHICK  
RSU448301                                 : ........LDCADILQKSGGKSGIFKIKPEGSQTELSVYCDQDTQIGGWLLIQQREDGSVNFNRTWQDYKHGFGSVDANGKGELWLGNKYIHMLSQN...ETILRVELEDWSAKQAFAEY.IFRLGSESEGFSLHASSYEG.SAGDALTEGSKED....SENTSHDKMKFSTYDRDNDKWEENCAEMYGGGWWYNNCQAANLNGIYYTGGQYDPRNVPFEIENGVVWLSFKPDDYSLKTVKMKIRPMETA................... : RSU448301  
FIBB_PETMA                                : CRVPVVSGMHCEDIYRNGGRTSEAYYIQPDLFSEPYKVFCDMESHGGGWTVVQNRVDGSSNFARDWNTYKAEFGNIAFGNPGEYWLGTKTVHQLTKQH..TQQVLFDMSDWEGSSVYAQYASFRPENEAQGYRLWVEDYSG.NAGNALLEGATQLMGDNRTMTIHNGMQFSTFDRDNDNWNPGCSREDAGGWWYNRCHAANPNGRYYWGGIYTKEQADYGTDDGVVWMNWKGSWYSMRQMAMKLRPKW..................... : FIBB_PETMA  
XLU19618                                  : CPIPVVSGKECEEIYRKGGETSEMYLIQPDSFFRPFKVYCDMATHDGGWTVIQNRQDGSVGFGRTWDSYKSGFGNIAANGPGEFWLGNEKISQLTNLG..ATEALFEMEDWDGAKVTAQYTGFTVQNEANKYQLSVSGYKG.TAGNALMDGASQLKGENRTMTIHNGMFFSTFDRDNDGWQHSCSKEDGGGWWYNRCHAANPNGRYYWGGYYTWDMAKHGTDDGVVWMNWKDSWYSMKKMSIKIRPYF..................... : XLU19618  
FIBB_CHICK                                : CNIPVVSGRECEDIYRKGGETSEMYIIQPDPFTTPYRVYCDMETDNGGWTLIQNRQDGSVNFGRAWDEYKRGFGNIAKSGPGEYWLGNDKISQLTKIG..PTKVLIEMEDWNGDKVSALYGGFTIHNEGNKYQLSVSNYKG.NAGNALMEGASQLYGENRTMTIHNGMYFSTYDRDNDGWLTTCSKEDGGGWWYNRCHAANPNGRYYWGGTYSWDMAKHGTDDGIVWMNWKGSWYSMKKMSMKIKPYFP.................... : FIBB_CHICK  
JN0596                                    : .....RQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMS.DGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKH.GEYWLGNKNLHFLTTQ..EDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG.TAGDSLAG...NFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGVYYSG......PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI............... : JN0596  
HSY16132                                  : TVTSADAIYDCSSLYQKNYRISGVYKLPPDDLSPELEVFCDMETSGGGWTIIQRRKSGLVSFYRDWKQYKQGFGSIR....GDFWLGNEHIHRLSRQ...PTRLRVEMEDWEGNLRYAEYSHFVLGNELNSYRLFLGNYTGNVGNDALQY..............HNNTAFSTKDKDNDNCLDKCAQLRKGGYWYNCCTDSNLNGVYYRLG......EHNKHLDGITWYGWHGSTYSLKRVEMKIRPEDFKP.................. : HSY16132  
consv                                     : ---------------------51-3-814------3-74-652--164-63632--5-223-182811-1-3--2-1-----86-9-52252-961----1416463814112--1271---615122-1-81614214-1-3764431---------------2-1---77182-1511--2-71--2798-642-1-5456-284----2----------2781--1421--1751-4175642----------------------- : consv

                                          : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261------ :
OrigSeq                                   : VQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV : OrigSeq

cons                                      : -----------HHHHH-------EEEEE-------EEEEEE-------EEEEEE-------HHHHHHHHHH------------EEE----EEEEE------EEEEEEE---------HH--EEEE------EEEEEEEE-----------------------------EEEE--------------------EEE----------EE-----------------EEEEE--------EEEEEEE------------------------- : cons

dsc                                       : -------------HH--------EEEEE-------EEEEEEE------EEEEEE-------HHHHHHHHHH-----------EEEE---HHHHHH------EEEEEEE---------HH--EEEE------EEEEEEEE-----------------------------EEEE-------------------EEEEE----------------------------EEEEE--------EEEEEEE-------------EEE--------- : dsc
mul                                       : -----------HHH---------EEEEE-------EEEEE---------EEEE--------------------------------------HHE--------EEEEHHH------HHHHE--E---------EEEE-----------------------------------------------------------------------------------------EEE---------HHHHHHE------------------------- : mul
nnssp                                     : -----------HHHHH-------EEEEE-------EEEE---------EEEEE------------------------------EE------EEE--------EEEEE---------------EEE------EEEEEEEE---------------------EEE-----EEE----------------------------------EE-----------------EEEEE----------EEE--------------------------- : nnssp
phd                                       : ----------HHHHHH------EEEEEEE------EEEEEE-------EEEEEE-------HHHHHHHHHH------------EEE----EEEEEE-----EEEEEEEE--------EEEEEEEE-----EEEEEEEE------------------------------EEEE--------------------EEE----------EE-----------------EEEEEE---EEEEEEEEEEEEE----------------------- : phd
pred                                      : -----------------------EEEEE-------EEEEEE-------EEEEEE-------------------------------------------------EEEEE------HHHHHH-------------------------------------------------EEE-----------------------------------------------------EEEE-------HHHHHHH-------------------------- : pred
zpred                                     : ------------EE---------EEEEE--------EEEEEE------EEEEEE------EEE-------------------HHHHHHHHHHEEE-------EEEEHHHH------HHHEEEEE------HHEEEEE--------EE----------------------EEE----------EEEE------EE----------EEE----------------EEEEE--------HHHHHHHEE------------------------ : zpred


You                                       :: You

access                                    : EEBEBBBBEEBBEBBEEEEE-BBBBBB-BEEEEEEBEBBBEBEEEEEBBBBBBEEEEEEBEBBEEBEEBEEBBE-B-EE-EEEBBBBBEBBBBBBEEEEEEBBB-BEBEE-EEEEBBBEBBBBEBBEEEEEBEBBBBBBEEEEBBEBBBEBBBEEEEEEEEBBB-BBBEBBE-EEEEEEBEBEBBEB-EBBBBBBBBBBBEBEBBBBEBEE--EEEBE-EB-EBBBBBBBEB-E-BBE-BEBEB-BEBBEBBEEEEEEEEEEEEE-EEE : access

PHD Rel                                   : 99666787415688632787561699983799875699986156798568999667896421034678642242238999862343132348772249872159988514665421122333565266432799985124665442113677789998761231133312211778765445542333675225412223688521126777754344556687368874355145665778864156655688766445788656899 : PHD Rel
Pred Rel                                  : 00667778777655569899977799958999976566557099999966088567999665557577768899989999976667677677675677767677755557779767777865677777767777756677999999768878789999986667899988688899999766655557898666789778899976778998878799997998768867998876588778808899886897995087999999000 : Predator Rel



  



Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability