Predictions for request ./t0010



T0010: bactericidal/permeability-increasing protein   : VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK : T0010: bactericidal/permeability-increasing protein  
CETP_RABIT                                            : YEAGIVCRITKPALLVLNQETAKVVQTAFQRAGYPDVSGERAVMLLGRVKYGLHNLQISHLSIASSQVELVDAKTIDVAIQNVSVVFKGTLNYSYTSAWGLGINQSVDFEIDSAIDLQINTELTAGSVRTNAPDCYLAFHKLLLHLQGEEPGWLKQLFTNFISFTLKLILKRQVCNEIN.TISNIMADFVQTRAASILSDGDIGVDISVTGAPVITATYLESHHKGHFTHKN.VSEAFPLRAFPPGLLGDSRMLYFWFSDQVLNSLARAAFQEGRLVLSLTGDEFKKVLETQG.FDTNQEIFQELSRGLPTGQAQVAVHCLKVPKISCQNRGVVVSSSVAVTFRFPRPDGREAVAYRFEEDIITTVQASYSQKKLFLHLLSGRLRTEAKASNLTESRSESLQSSLRSLIATVGIPEVMSRLEVAFTALMNKGLDLFEIIIITLDGCLLLQMDFGFP : CETP_RABIT  
PLTP_HUMAN                                            : EFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKE.....GHFYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFFYDGGYINASAEGVSIRTGLELSRDP.AGRMKVSNVSCQASVSRMHAAFGG.TFKKVYDFLSTFITSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGSIV.LLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFA : PLTP_HUMAN  
HSLBPX13                                              : ANPGLVARITDKGLQYAAQEGLLALQSELLRITLPDFTGDLRIPHVGRGRYEFHSLKIHSCELLHSALRPVPGQGLSLSISDSSIRVQGRWKVRKSFFKLQGFFDVSVKGISISVNLLLGS.ESSGRPTVTASSCSSDIADVEVDMSG.DLGWLLNLFHNQIESKFQKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIFHRNHSSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITDDMIPPDSNIRLTTKSFRPFVPRLARLYPNMNLELQGSVPSAPLLNFSPGNLSVDPYMEIDAFVHLPSSSKEPVFRLSVATNVSATLTFNTSKITGFLKPGKVKVELKESKVGLFNAELLEALLNYYILNTFYPKFNDKLAEGFPLPLLKRVQLYDLGLQIHKDFLFLGANVQYM : HSLBPX13  
BPI_RABIT                                             : ..........QKGLDYACQQGVAVLQKELEKIRIPDVSGKFKLRPFGKGHYNFHSLVVRSFQLPNPQIRLQPNVGLRVSISNANVRIGGRWKARKGFIKVRGKFDLSVEGVSISADLKLGSVPASGRATVTCSSCSSNINRARLRSQASWGGWL.KLFHKRIESSLRNTMNSKICQVLTSSVSSKLQPYVETLPLKERLDSVAGIDYSLVAPPRATADSLDMQLKGEFYNVARPSPPPFMPPPMAIPSLHDRMIYLAISDYLFNTAALVYQQAGAFGLTLRDDMIPKESKSRLTTKFLGKALPQVAKMFPNMNVQLTLSVSSPPHLTTRPTGIALTAAVDLQAFAILPNSSLASLFLLGLKLNTSAKIGTKADKLVGELTLGRLILELKHSNIGSFPVQLLQALMDYVLSAVVLPKVNEKLQRGLPLPMPRKVQLYDLVLQPHQDFLLLGANVQHG : BPI_RABIT  
BPI_BOVIN                                             : TNPGIVARITQKGLDYACQQGVLTLQKELEKITIPNFSGNFKIKYLGKGQYSFFSMVIQGFNLPNSQIRPLPDKGLDLSIRDASIKIRGKWKARKNFIKLGGNFDLSVEGISILAGLNLGYDPASGHSTVTCSSCSSGINTVRIHISGSSLGWLIQLFRKRIESLLQKSMTRKICEVVTSTVSSKLQPYFQTLPVTTKLDKVAGVDYSLVAPPRATANNLDWLLKGEFFSLAHRSPPPFAPPALAFPSDHDRMVYLGISEYFFNTAGFVYQKAGALNLTLRDDMIPKESKFRLTTKFFGILIPQVAKMFPDMQMQLFIWASLPPKLTMKPSSLDLIFVLDTQAFAILPNSSLDPLFLLEMNLNLSVVVGAKSDRLIGELRLDKLLLELKHSDIGPFSVESLQSVINYVMPTIVLPVINKKLQKGFPLPLPAYIELFNLTLQPYQDFLLFGADVQYS : BPI_BOVIN  
S17448                                                : ETVGTLARIDKDELGKAIQNGGPILQNVLGTVTNQGLLGAGGLLGGGLLSYGGLFSLVEELSGLKIEELTLPTVSIKL.LPGVGVQLSLHTKVSLHSGPLVGLLQLAAE.VNVSSKVALGMSP.RGTPILILKRCNTLLG..HISLTS...GLLPTPIFGLVEQTLCKVLPGLLCPVVD.SVLSVVNELLGATLSLVPLGPLGSVEFTLATLPLISNQYIELDINPIVKSIAGDVIDFPKPRLVKMPPKEDHTSQVTVPLYLFNTVFGLLQTNGALDLDITPEMVPRNIPLTT.TDLAALAPEALGKLPPGQHLLLSLRVMKSPMILLQNKKVTVSIPVTIHVLSSVPQGTPVALFQMNGVMTLNAHLVPSTTKLHISLSLERLTVQLASSFSQPFDASRLEEWLSDVVRAAYMQKLNEHLEVGIPLPKILNVNFANSVVDVIENAVVLTVAP... : S17448  
S17447                                                : TGALGPGGLLGTGGILANEG.ILAGQGGLLGGG..GLLGDGGLLGGGVLGEGGILSTVQGITGLRIVELTLPRVSVRL.LPGVGVYLSLYTRVAINGKSLIGFLDIAVE.VNITAKVRLTMDR.TGYPRLVIERCDTLLGGIKVKLLR...GLLPNLVDNLVNRVLANVLPDLLCPIVD.VVLGLVNDQLGLVDSLVPLGILGSVQYTFSSLPLVTGEFLELDLNTLVGEAGGRPAMLPRPQMELPPMGDNTNSQLAISANFLSSVLTMLQKQGALDIDITDGMFEDLPPLTT..STLGALIPKVFQQYPESPLTIRIQVPNPPTVTLQKDKALVKVFATSEVVVSQPNDVETTICLIDVDTDLLASFSVEGDKLMIDAKLDKTSLNLRTSNVGNFDVFILEMLVEKIFDLAFMPAMNAILGSGVPLPKILNIDFSNADIDVLEDLLVLST..... : S17447  
consv                                                 : --------1-22362362731514673271363--45242--1----2525351142821646333231355233826-9245681635425424242122-2464523-76424281962-1-3-333644-4-34-62--261343---448-4461338422732282248-4284-56452753563531422-44-26486666421-2576449831455-63-16--4-13422232-2511454647656625676763-44443-1717293334621332335--3333-54-18432353526281637324-27454323526-226343513-2-531123642732-52546-55235339251613285264431-143131411-73273256-45466166236219656544128673322834424585755---1- : consv

                                                      : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301-------311-------321-------331-------341-------351-------361-------371-------381-------391-------401-------411-------421-------431-------441-------451--- :
OrigSeq                                               : VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK : OrigSeq

cons                                                  : -----EEEE--HHHHHHHHHHHHHHHHHHHHH------------------EEEEEEEEEE---------------EEEEE----EEEEEEEEEEE--------EEEEEE-EEEEEEEE----------EEEEE--------EEEEE-----HHHHHHHHHHHHHHHHHHHH--HEEEEE---HHHH--------EEEE------EEEEE-------HHHHHHHH--EEEE----------------------EEEEEE---HHHHHHHHHHH----EEEE-----------------HHHHHHHHHH------EEEEEEE------EE-----EEEEEEEEEEEEE-------EEEEEEE--EEEEEEE-----EEEEEH---EEEEE---------HHHHHHHHHHHHHEEE--HHHHHHH------------EE-HHH----HEEEE------- : cons

dsc                                                   : ----EEEEE--HHHHHHHH---HHHHHHHHEEE---------------EEEEEEEEEEEE--------------EEEEEE---EEEEEEEEEEEEEEEEEE--EEEEEE-EEEEEEEEE--------EEEEEE--------EEEEE----------HHH--HHHHHHH-----EEEEE---EEEEE-----EEEEEEE-----EEEEEEE--------HHEEEE--EEEE----------------------EEEEEE------HHHHHHHH--EEEEEE-------------------------HH------EEEEEEE-----EEE----EEEEEEEEEEEEEE-------EEEEEEE--EEEEEEE------EEEEHHHHHEEEE-----------HHHHHHHHEEEEEE--HHHHHHH----------EEEEEEEE----EEEEE------- : dsc
mul                                                   : -----EEEE------------HHHHHHHHHH------------------------EEE-----------------EEEEE-----E-----------E--------H-H-HEE--HHE----------EEEE--------HHH-E-------HHHHHHHHHHHHHHHHH----EEEEEE----E------EEEEH---------E-EEE----------HHHH-H-HH----------------H--------HEEEE---------HHH----HHEEE-----------HHHH-------H-----------HEEEEE-------E------EEEEEHHHHHEEH------HHEEEEHHHH--HHHH------HHHHHH--HHHHH----------HHHHHHHHH--HHE----HH----HH----------EHHHH-HH----EEEE------- : mul
nnssp                                                 : -----EEEE-HHHHHHHHHHHHHHHHHHHHHH-----------------------EEE------------------EEEE----EEE-----------------------------------------EEE----------EEEEE------HHHHHHHHHHHHHHHHHH-HHHHHHHHH--------------------------EEE--------HHHHHH-----------------------------EEEEEE---HHHHHHHHHHH----EEEE--------------HHHHHHHHHHHHH------EEEEEE--------------EEEE--EEEEEE--------EEEEE------EEEEE-----EEE------EEEE----------HHHHHHHHHHHHHHH----------------------HHHHHH-----EEEE------- : nnssp
phd                                                   : -----EEEEE----HHHHHHHHHHHHHHHHH-------------------EEEEEEEEEEE------EE------EEEEE----EEEEEEEEEEE-------EEEEEEE-EEEEEEEE----------EEEEE--------EEEEE----HHHHHHHHHHHHHHHHHHHHH---EEEEE---HHHHHHHH----EEEE------EEEEE-------HHHHHHHH--EEEE----------------------EEEEEEEEHHHHHHHHHHHHH---EEEE-----------------HHHHHHHHHH------EEEEEEE------EE-----EEEEEEEEEEEEE--------EEEEEEEEEEEEEEEE----EEEEEE---EEEEEE--------HHHHHHHHHHHHHEEEE-HHHHHHH------------EE-HHHH-HHHEEEEE-E---- : phd
pred                                                  : ----EEEE--HHHHHHHHHHHHHHHHHHHHHH---------EEE--------------------------------EEEE----EEE---HHHHHHHH-------EEE-----HHHHH----------EEEE-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------EEE-------HHHHHHHH----------------------------EEEEE---EEEHHHHHHHHH---EEEEE----------------------------------EEEEE--------------EEEEEEEEEEEEE----------HHHHH-----------HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH---HHHHHHH-----------EEE----------EEEE------- : pred
zpred                                                 : ------EEE-----EEEHHH--HHHHHHHEEEE------------------EEEEEEEEEE-----EEEEE---EEEEEEEEEEEEEEE---EEEEEE------EEHHHHHHHHHHEEEE------EEEEEE---------EEEE-------EEEEEE--HHHHHHHHHH--EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE---HHHHHHHHHHHHHHHE-----------------HHHHHHHEEEEEEEEEEHHHHHHHHHHHHHEEEEH------HHHHH---------HHHHE------HHEEEEEE----EEEEE---EEEEEEEHHEEEE-------EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHEEEEEEEEHHHHHHH--EEEEEEEEEEEEEEEEEEHHHHEEEHHH----- : zpred


You                                                   :: You

access                                                : EEEEBBBEBBEEBBEBBBEEBBEBBEEEBEEBEBEEBBEEBBB-BBBEBBBBBBBBBBBBBEBBEBEB-BBEEEBBEBBBEEBBBEBEBEBEBBEEBBEBBBBBEBBBEBBBBBBEBEBBEEEEEEEBEBBBBBBBBBBBEBBBEBEEEEBEBBBEBBEEBBEBBBEEBBEEEBBEBBEEBBBBBB-EBBEBBEBBBEBEEBBBBEBBBBBBEEBBBEBBEB-BEB-BBB-BEEEEE-B-EEBBEBBEEEE-BBBBBBBEBBBBBBBBBBBEBBBBBBBB-EEBBEEEBEBEB-BEBBBEBBEEBBEBBEEBEBEBBBBBBEBEEBEBEEEEBBBBBBBBBBBBBBBEEEEEBBBBBBEBEBEBBBEBBBEBEEBBBEBEBEEBBBEBEEEEBEEBBBEBBEBBBEBBBBBBBBBEBBEEBEEBBEBE-BEEBEBBBBBBEBBEBBBBBBBEBE-E : access

PHD Rel                                               : 999804777453112477642699999987633555466511111674311236786754315555322167854499944872699754345221112243122354113788751237688899944887335455432588841655247999989999999999632110345413222233564255521222155333355432774431688756313302213799999989988999987885278866413777899988761531243235778767886423321134577787627699648999854898612437982799864689988538998641687852114577764446421466322543888743678964358999999875211441135434232888988553112311221111123111020269 : PHD Rel
Pred Rel                                              : 000005096777688779806899999998850899998866667778776666656765577858666099988679657666565666578887757889665555675565555556899999766957789866587766666688665788888888888998877655587756656586888656676666788768776776877666558877766666677899998999065859777776570675665666688877776666656788898907065578766888566666589996655665670099776799996776675556699689999855766765666655555667677778706687667577778886888799998888885506667768866880998865567565676777658856766000 : Predator Rel



  



Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability