Predictions for request ./t0024



t0024; UBC9 from mouse/human, 166a.a. (8 extra residues at N-terminus are from cloning sequence)   : GSPGISLNMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS : t0024; UBC9 from mouse/human, 166a.a. (8 extra residues at N-terminus are from cloning sequence)  
UBCY_ARATH                                                                                         : SSAPSRKALSKIACNRLQKELSEWQLNPPSGFRHKVT......DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPASHPHIYSNGHICLDILYD..SWSPAMTVNSVCISILSMLSSPAKQRPADNDRYVKNCKNGR.SPKETRWWFHDDKV. : UBCY_ARATH  
UBC1_CAEEL                                                                                         : ........MTTPSRRRLMRDFKKLQEDPPAGVSGAPT.....EDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQN..RWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWLN : UBC1_CAEEL  
UBC2_SCHPO                                                                                         : ........MSTTARRRLMRDFKRMQQDPPAGVSASPV.....SDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQN..RWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSWES : UBC2_SCHPO  
UBC3_ARATH                                                                                         : ........MTTPAKKRLMWDFKRLQKDPPVGISGAPQ.....DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQN..QWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQSYV. : UBC3_ARATH  
UBCI_MESAU                                                                                         : ........MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKRFRAQAKKFCPS : UBCI_MESAU  
UBC4_DROME                                                                                         : ........MANMAVSRIKREFKEVMRSEIVQIKIELV.....NGQLTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKARFITRIWHPNISSVGAICLDILKD..NWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG : UBC4_DROME  
UBCB_YEAST                                                                                         : ENENSSSIQPNLSAARIRLKRDLDSLDPPTVVITSPDS...ADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILRE..DWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGSIE : UBCB_YEAST  
UBC7_YEAST                                                                                         : ........MSKTAQKRLLKELQQLIKDSPPGIVAGPKS....ENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLGF : UBC7_YEAST  
UBC7_SCHPO                                                                                         : .......MSKAMPLRRLMKEYKELTENGPDGITAGPSN....EDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHASERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKTLGL : UBC7_SCHPO  
CELF29B92                                                                                          : ........MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYAAE : CELF29B92  
ATU44976                                                                                           : .......MASGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQYPAL : ATU44976  
UBC3_SCHPO                                                                                         : ........MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP. : UBC3_SCHPO  
UBC9_YEAST                                                                                         : ........MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK. : UBC9_YEAST  
UB6B_MOUSE                                                                                         : KLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPK.....GDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKD..NWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT. : UB6B_MOUSE  
SPAC11E33                                                                                          : ..........MALPKRIIKEIETLTRDPPPGIVAAPT.....EDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKK..DWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV. : SPAC11E33  
UBCC_YEAST                                                                                         : .........MASLPKRIIKETEKLVSDPVPGITAEPH.....DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKT..NWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK : UBCC_YEAST  
UBC1_HUMAN                                                                                         : ........MANIAVQRIKREFKEVLKSETSKIKVDLV.....DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVGAICLDILKD..QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA : UBC1_HUMAN  
S57619                                                                                             : ..........MVDLARVQKELHECNRDQVSGINVTLK.....GDSLTHLIGTIPGPVGTPYEGGTFKIDITLTDGYPFEPPKMKFATKVWHPNISSQGAICLDILKD..QWSPALTLKTALLSIQALLSAPEPDDPQDAVVAQQYLREHQTFVGTARYWTETFAKT : S57619  
UBC1_YEAST                                                                                         : ..........MSRAKRIMKEIQAVKDD..PAITLEFVS....ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVGAICLDILKN..AWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE : UBC1_YEAST  
CELF56D22                                                                                          : RETADALLFDVETNSRVKEEKAKWDERTPQGYTAKPISFEG.ADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK.WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ.EHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWTVNPN : CELF56D22  
CEF49E126                                                                                          : STLQAAAHGRIVQLSRIRKEIADLAKN.KRRFIKDFRK...IEKCKDIFQFKIIG.DGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVCELCSPMLLQ.ENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKKWN.. : CEF49E126  
consv                                                                                              : ----------21-13-822521-2114---251214-------122--41116-3--25-8223-6-517-5-1-8-316-2627-1151-7483118-86416-12--1-35244722663384187216313464211251-2132---2-1132-13-11--- : consv

                                                                                                   : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161--- :
OrigSeq                                                                                            : GSPGISLNMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS : OrigSeq

cons                                                                                               : ----------HHHHHHHHHHHHHHH------EEE-------------EEEEEE------------EEEEEE-----------EEEE-------------EEEEE----------HHHHHHHHHHHHHH---------HHHHHHHHHH-HHHHHHHHHHHHHHH--- : cons

dsc                                                                                                : -----HHHHHHHHHHHHHHHHHHH-------EEE----------HHHHHEEEE------------EEEEEE------------EEE-------------EEEHHHHH------HHHHHHHHHHHHHHH---------HHHHHHHHH-----HHHHHHHHHHH---- : dsc
mul                                                                                                : -----------HHHHHHHHHHHHH--------EE------------H--HEE-------------EEEEEEE-----------HEEE-----------EEEEEEHH---------HH-EEEEEHHHHH----------HHHHHHH-----HHHHHHHHHHHH---- : mul
nnssp                                                                                              : ----------HHHHHHHHHHHHHHHH-----EE--------------------------------EEEEEE----------------------------EEEEE------------HHHHHHHHHHHH----------HHHHHHHHH-HHHHHHHHHHHHHHHH-- : nnssp
phd                                                                                                : -----------HHHHHHHHHHHHHH------EEEEE-----------EEEEEEE----------EEEEEEE-----------EEEEE-----------EEEEEE----------HHHHHHHHHHHHHHH--------HHHHHHHHHH-HHHHHHHHHHHHHHH--- : phd
pred                                                                                               : ---------HHHHHHHHHHHHHHHH----------------------------------------EEEEE------------EEEE-------------EEEE------------HHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHH---- : pred
zpred                                                                                              : ----------HHHHHHHHHHHH---------EEE---------------EEE-------EEE---EEEEEE-----------EEEEE--EEE------EEEEEEE-------HHHEEEEEEEEEEEEE--------HHHHHHHHHH----HHHHHHHHHH------ : zpred


You                                                                                                :: You

access                                                                                             : EEEEBBBBBBBBBBEEB-EEBEEBEEE-EEEBBBEB-EEEEBEEBBBBBBBBBEEEEE-E-EEBBBEBBBEBEEE-EEEEEEBEBBBEBB-BEB-BBBBBBBBBBEEEEE-EEBBBBEBBBBBBBBBBEEEEEEEEBEBEBBEBBBEEEEEBEEEBEEBBEE--EE : access

PHD Rel                                                                                            : 9996555544226899999999997299996576216999987643124543227788877686389998236899999982123413668777888636687625788886111499999999999606888984125799998542279999999999763489 : PHD Rel
Pred Rel                                                                                           : 0000006955778899090009978800990778889899999665555557789909999990658885689999900090076687009990889865656677879907766658878999888779900000777878888866658999999997776000 : Predator Rel



  



Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability