Predictions for request ./t0054



T0054 VanX, Enterococcus faecium   : MEIGFTFLDEIVHGVRWDAKYATWDNFTGKPVDGYEVNRIVGTYELAESLLKAKELAATQGYGLLLWDGYRPKRAVNCFMQWAAQPENNLTKESYYPNIDRTEMISKGYVASKSSHSRGSAIDLTLYRLDTGELVPMGSRFDFMDERSHHAANGISCNEAQNRRRLRSIMENSGFEAYSLEWWHYVLRDEPYPNSYFDFPVK : T0054 VanX, Enterococcus faecium  
VANX_ENTFA                         : MENGFLFLDEMLHGVRWDAKYATWDNFTGKPVDGYEVNRIIGTKAVALALREAQIHAARLGYGLLLWDGYRPKSAVDCFLRWAAQPEDNLTKEKYYPNIERAELITKGYVASQSSHSRGSTIDLTLYHLDTGELVSMGSNFDFMDERSHHTAKGIGNAEAQNRRCLRKIMESSGFQSYRFEWWHYKLIDEPYPDTYFNFAVS : VANX_ENTFA  
consv                              : --5--6----88----------------------------8--638-47-46-644--56-------------5--7--87------7-----4-----8-7-8-7------6-------7------7-------6---6----------7-5--776------4--4---8---77-57-----4-4-----77--7-6-4 : consv

                                   : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------- :
OrigSeq                            : MEIGFTFLDEIVHGVRWDAKYATWDNFTGKPVDGYEVNRIVGTYELAESLLKAKELAATQGYGLLLWDGYRPKRAVNCFMQWAAQPENNLTKESYYPNIDRTEMISKGYVASKSSHSRGSAIDLTLYRLDTGELVPMGSRFDFMDERSHHAANGISCNEAQNRRRLRSIMENSGFEAYSLEWWHYVLRDEPYPNSYFDFPVK : OrigSeq

cons                               : ----HHHHHHHHHH----------------------EEEE---HHHHHHHHHHHHHHHHH---EEEE------HHHHHHHHHHH----------------HHHHHH--EEEE----------EEEEEE-----EE-----------------------HHHHHHHHHHHHHH-------HHHHHHHH--------------- : cons

dsc                                : ----HHHHHHHH------------------------HHHH---HHHHHHHHHHHHHHHHH---EEE--------HHHHHHHHH-----------------HHEEE---EEEE--------EEEEEEE-------------------------------HHHHHHHHHHHHH-----------EEEEE---------EEE--- : dsc
mul                                : ------HHHHHHHHHH-----------------------EE---HHHHHHHHHHHHHHH----EEEE--------EEEEHHH---------------------EH---EEE----------EEEEEE------EE------HHH-----HH-------H------H---H------------HHE----------------- : mul
nnssp                              : ----HHHHHHHH------------------------HHHHH--HHHHHHHHHHHHHHHH----EEE--------HHHHHHHHHH----------------HHHHHH--EE-------------EEEEE-----EE-----------------------HHHHHHHHHHHHHH-------HHHHHHHH--------------- : nnssp
phd                                : -------EHHHHHH-HHHHHHHHHH-----------EEEE---HHHHHHHHHHHHHHHHH---EEEE------HHHHHHHHHHH--------------HHHHHHHH---EEEE---------EEEEEEE---EEEE---------------------HHHHHHHHHHHHHHH------EHHHHHHHHH-------------- : phd
pred                               : -------HHHHHHHH-------------------EEEEEEE-HHHHHHHHHHHHHHHHHH---EEEE------HHHHHHHHHHH------------------------EEE---------EEEEEEEE---------------HHHHHHH----------HHHHHHHHHHH------HHHHHHEEEE--------------- : pred
zpred                              : HHHHHHHHHHHHHHHHHH-E-------------EEEEEEEEEEEHHHHHHHHHHHHHHH--EEEEEEE-------EEEEHHHH---------------HHHHHHHHHHEHEEE-------EEEEEEEE----EEEE----HHHHHHHHHHH-------HHHHHHHEEEEEE--------HHHHH-----------EEEEE-- : zpred


You                                :: You

access                             : EEBBBBBBEEBBEBB-BEBE-BBBEEBEEEEBEB-EBB-BBBB-BBBEBBEEBEBBBBEBBBBBBBBEE-EEEEBBEBBBEBBBEEEEEBEEEEB-EEBE-BEBBBEB-BBBEBEEEEBBBBEBBBB-BEEEEBBEBBB-BEBBEE-BEEBBEBBBBBEBEEEEBBEEBBEBBEBEBBBBEBBBBBB-EEE-EEBBBEBBBE : access

PHD Rel                            : 9775221125543121244444222227878895420133241699999999999999825742565378960578899998527644665677875431435422232577548999951127877626846553676532256653334465575288869999999993576421112331231126797544434349 : PHD Rel
Pred Rel                           : 0076678655786865670076689999999097760869666899999990999999069960066790997776809900007000990700079978657050000560099909965505580878889788899007057007755588887766600990090770897006508900065099900999880000 : Predator Rel



  



Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability