Predictions for request ./t0056

T0056 DnaB helicase N-terminal domain, E.coli   : MKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVREMIS : T0056 DnaB helicase N-terminal domain, E.coli  
DNAB_MYCLE                                      : GRQPPQDLAAEQSVLGGMLLSKDAIADVLERLRSGDFYRPAHQNVYDAILDLYGRGEPADAVTVAAELDRRGLLRRIGGAPYLHTLISTVPTAANAGYYAGIVAEKALLRRLVE : DNAB_MYCLE  
RNDNAB                                          : GRVPPQAVELEQAVLGAMLIEPEAIPRALEILTPEAFYDGRHQRIFRAIVRLFEQNRGVDLLTVTEELRRTGELEQAGDTIYLSELTTRVASAANVEYHARIIAEKALLRRMIE : RNDNAB  
AE00112310                                      : NSALLFNDGAEKAVISSIFYNSDKIEQIAFHVRADDFYNETHKLIFKAMVSLYEKRENIDPITVFEEVSKHVKKDLINLPDYLDSLSVYLPTDRTINVYAKIVKEQSVRRSILN : AE00112310  
S43527                                          : FYAPPHSIEAEQAVIGGLLLDDERVQKVLAMLKPDSFYSRPHKIIFEEITRMHREQKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAIN : S43527  
DNAB_HAEIN                                      : VSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELIS : DNAB_HAEIN  
DNAC_BACSU                                      : DRLPPQNIEAEQAVLGAIFLQPSALTLASEVLIPDDFYRMSHQKIYNAMLVLGDRGEPVDLVTVTSELANTDLLEEVGGISYLTDIANSVPTAANIEYYAKIVEEKSILRRLIR : DNAC_BACSU  
DNAB_SYNY3                                      : PALPPQNIEAEECILGGILLDPEAMGRIIDLLVVDAFYVKAHRLIYEAMLSLHGQSQPTDLMSVSSWLQDHHHFEAIGGMVKLTQLLDRTISAVNIDRFAALIMDKYLRRQLIA : DNAB_SYNY3  
DNAB_ODOSI                                      : EKYLPHNFLAEKIVLSSLLISSEAIETCLRSLTIDAFYFKNHREIYKAILIMYKKNTPIDIVTLNTFLQNQGLLPKIGGIKVLIELVNQLPNLVYLEEYIRIIQDKYVRRSLIK : DNAB_ODOSI  
consv                                           : -235544226-5489778765152521641183334----2-61884382-82233355-47782328234-11116622-39-4941364722662-66268285472-2682 : consv

                                                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111- :
OrigSeq                                         : MKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVREMIS : OrigSeq

cons                                            : -------HHHHHHHHHHH---HHHHHHHHHHHH-------HHHHHHHHHHHHHH------HHHHHHHHHHH--------HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH : cons

dsc                                             : -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH--HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH : dsc
mul                                             : -------HHHHHHHHH-HH-----HHHHHHHHHHHHHHH---HHHHHHHHHHH------EEEEHHHHHHHH-HHH------HHHHH-----------HHHHHHHHHHHHHHH-- : mul
nnssp                                           : -------HHHHHHHHHHH---HHHHHHHHHHHH--------HHHHHHHHHHHHH------HHHHHHHHHHH--------HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH : nnssp
phd                                             : -------HHHHHHHHH-----HHHHHHHHHHH--------HHHHHHHHHHHHHH-------EEEHHHHH----------HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-- : phd
pred                                            : ------HHHHHHHHHHHHH----HHHHHHHHHH-------HHHHHHHHHHHHHH-------HHHHHHHHHHHH---------HHHHHH-----HHHHHHHHHHHHHHHHHH--- : pred
zpred                                           : -------HHHHHHHHHHEEE-HHHHHHHHHEEEHHHHHHHHHHHHHHHHHHH------EEEEEHHHHHHHH----------EEEEEE------EEHHHHHHHHHHHHHHHHHHE : zpred

You                                             :: You

access                                          : EE--EEB-EBEEBBBBBBBBEEEBBEEBBEBBBBEBB-B-BBEBBBEBBBEB-EEEEEBEBBBBBEEBEEEE-BEEBBBBBBBBEBBEEBBEBBBBBBBBEBBBEEBBBEEBBE : access

PHD Rel                                         : 999993258999985212235245999999863443222157899999999993599986123224552156421026613679996226123338899999999999999529 : PHD Rel
Pred Rel                                        : 000000685868888866589777889997807898877756887999999976799996567888888866755578855557885787777777899999999997777000 : Predator Rel


  


Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability