Predictions for request ./t0059

T0059 Sm D3 protein (The N-terminal 75 residues)   : MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPD : T0059 Sm D3 protein (The N-terminal 75 residues)  
ATTS1964                                           : ...MLPLSLLRTAQGNPMLVELKNGETYNGYLVNCDTWMNIHLRQVICTSKDGRLWRMTECYIRGNTIKYLRVPD : ATTS1964  
SMD3_YEAST                                         : TMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPD : SMD3_YEAST  
SMD3_CAEEL                                         : .............RSHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNVFIRGNKIRFMILPD : SMD3_CAEEL  
CELF32A55                                          : ..MVLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGKFFKMSEAYVRGSTIKYLRIPE : CELF32A55  
consv                                              : ----111-11--26645747-638-37-6-6-236855--75826665-236-3335846688--85-88838-8 : consv

                                                   : 1---------11--------21--------31--------41--------51--------61--------71--- :
OrigSeq                                            : MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPD : OrigSeq

cons                                               : -----EHHHH------EEEEEE-------EEEEE------EEEEEEEEE-----EEEEEEEEE----EEEEEE-- : cons

dsc                                                : ---EEEEE--------EEEEEE-----EEEEEEE------EEEEEEEEE------EEEEEEEE----EEEEE--- : dsc
mul                                                : ------HHHHH------EEEE----------HHH-----HHHHHEEEEE------HH--EEEE----EEEEEE-- : mul
nnssp                                              : ------HHHHHH----EEEEEE---------EE-------EEEEEEEEE-----EEEE--EEE----EEEEEE-- : nnssp
phd                                                : -----E--EE------EEEEEE----E--EEEEEE------EE-EEEEEE----EEEEEEEEEE--EEEEEEE-- : phd
pred                                               : -----HHHHHHHH----EEEEE---------EEE----------EEEEE-----------EEE----EEEEE--- : pred
zpred                                              : ------------HH--EEEEEE-HHHH---EEEHHHHHHHHHHEEEEEE-------EEEEEEEH---EEEEEE-- : zpred

You                                                :: You

access                                             : EBBBBBBEBBEEBEE-BBBBEBEEEEBBEBEBBEBEE-BEB-BBEBBBBBEEEEBBEBBEBBBEBBEBEBBBBEE : access

PHD Rel                                            : 965421210023458647989459731214644633665203222589934991554223666404037787339 : PHD Rel
Pred Rel                                           : 008877576788879667806799997888666657677755555898879996573655586886665770000 : Predator Rel


  


Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability