Predictions for request ./t0063



T0063 Translation initiation factor 5A, Pyrobaculum aerophilum   : MVLKWVMSTKYVEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMRDYKTIEVPMKYVEEEAKGRLAPGAEVEVWQILDRYKIIRVK : T0063 Translation initiation factor 5A, Pyrobaculum aerophilum  
IF51_CHICK                                                       : TGDAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGIQDGYLSLLTEEVREDLKLPEGDLGKEIEGKFNANEQISVISAMNEECAVAIK : IF51_CHICK  
IF52_CAEEL                                                       : TGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAIDDGYCSLMDPEQKDDLKLPDTELGQQIRDAYEKDELVQVVSAIGEEAILGWK : IF52_CAEEL  
AF034943                                                         : KADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISDGFVSLLTSNTKDDLRLPTDELVAQIKEGFESGKVVTVQSAMGEEQICALK : AF034943  
IF52_YEAST                                                       : TADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDIDDGFLSLMNMDTKDDVKAPEGELGDSLQTAFDEGKMVTIISAMGEEAAISFK : IF52_YEAST  
IF5A_DICDI                                                       : QAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDVQDGYLSLLDAEVKEDLALPEDDIGKEITQMLKEGKLVSVISALGKEGVVSVK : IF5A_DICDI  
IF5A_NEUCR                                                       : SVDAGRSATYPMQCSALRKGGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDEDFLVLIDSEEKRELKMPEGELAKRIEKLEEEGKFVGVQTAMGEEAAIDVK : IF5A_NEUCR  
SPAC26H59                                                        : GGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNIDDGYLNLMTTTTKDDVRLPEGELGNEIEEGFDEGRIITVVSAMGEETALACR : SPAC26H59  
IF5A_METJA                                                       : ..MIIMPGTKQVNVGSLKVGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVPIIDRRKGQVLAIMGDMVQIMDLQTYETLELPIP....EGIEGLEPGGEVEYIEAVGQYKITRVI : IF5A_METJA  
E69330                                                           : .......MKQQVEVRQLREGGYVVIDDEPCEILSISVSKPGKHGAAKARIDAIGIFDSQKRSIVQPVTAKIYVPIVERKRAQIISVTGNVAQLMDLETYETFELEVP...EELKDKMEQGREVIYLESLGKRKIERMA : E69330  
AB0052159                                                        : .....MGDKTKVQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDMETYETFEVPIDTVADEIRDQLKEGINVEYWETLGRIKIMRIK : AB0052159  
A69216                                                           : ......MSKKVVEVKTLKVGKYVIIDGEASKITNISTSSPGKHGSAKARVEAVGIFDNQKRSFVKPVDSKVDIPIIDKRTAQVIAIMGGDVQLMDLETYETFETPIP...DELSEQLVEGVEVEYIEALGQRKLMRTK : A69216  
IF5A_SULAC                                                       : ..MGIQMSIQYTTVGDLKVGSYVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYETFDLEKP.TENEIVSKIRPGAEIEYWSVMGRRKIVRVK : IF5A_SULAC  
consv                                                            : -1-----143135732881626879541666865744746----2--74639848-532434242-5524748-283822556423224264986142555625421----461223114128254447452363252 : consv

                                                                 : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131----- :
OrigSeq                                                          : MVLKWVMSTKYVEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMRDYKTIEVPMKYVEEEAKGRLAPGAEVEVWQILDRYKIIRVK : OrigSeq

cons                                                             : -----E------EE-------EEEE-----EEEEEE---------EEEEEEEEEE------EEE---------EEE----EEEEEE---EEEEE--------------HHHHHHHHH----EEEEEE-----EEEEE- : cons

dsc                                                              : ----------EEEE-------EEEE------EEEEE---------EEEEEEEEEE----------------EEEE------EEEEE----EEEE----------------HHHHHHH----EEEEEE------EEE-- : dsc
mul                                                              : ---------------------EEEE-----EEEEE----------HHH-EEHHHHHH------E--------E-EE-----EEEE-----HHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHHH-HHHHHEE- : mul
nnssp                                                            : ---------------------EEEEE----EEEEE------------EEEEEEEE------EEE----------EE-----EEEEE---EEEE-------------HHHHHHHHHHHH---EEEEE-------EEEEH : nnssp
phd                                                              : -----E------EEEEEE---EEEE----EEEEEEEEE-------EEEEEEEEEEE----EEEE---------EEE----EEEEEE---EEEEEE-------------HHHHHHHHH----EEEEEE----EEEEEE- : phd
pred                                                             : ---EEE---------------EEEEE----EEEEEE----------EEEEEEEEE-------------------------EEEEE-----EEE---------------HHHHHHHHH----EEEEE------EEE--- : pred
zpred                                                            : -----------EEEEHH---EEEEEE----EEEEEHH---HHHHHHHHHEEEHHHHH------EE-----EEEEEHHHHHHEEEEE---EEEEHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH : zpred


You                                                              :: You

access                                                           : EEEBBBBBEBEBEBEBBEEEBBBBBEE-EBEBBEBBBEEE-EEEEBEBBBBBBBBBEEEE-EBBBEBEBEBEBBBBEEEEBEBBBB-EEBBBBBEBEBEEEBEBEEEEBBEEBEEEBEEEEEBBBBBBBBEEBBBEBE : access

PHD Rel                                                          : 985420563112131221582899818981899998717788663359999999726973356524789841124212321799833772788726554421167643158999975389649898545523455439 : PHD Rel
Pred Rel                                                         : 000067808665765668899000909997900080898999999658689996679976555089999988766666005666679906666789776556678987777777886698650900786677666000 : Predator Rel



  



Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability