Predictions for request ./t0071



T0071 Alpha adaptin ear domain, rat   : SEDNFARFVCKNNGVLFENQLLQIGLKSEFRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLNLQTKPVDPTVDGGAQVQQVINIECISDFTEAPVLNIQFRYGGTFQNVSVKLPITLNKFFQPTEMASQDFFQRWKQLSNPQQEVQNIFKAKHPMDTEITKAKIIGFGSALLEEVDPNPANFVGAGIIHTKTTQIGCLLRLEPNLQAQMYRLTLRTSKDTVSQRLCELLSEQF : T0071 Alpha adaptin ear domain, rat  
DMALPADPT                             : AVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGRLGLFYGNKTQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPTIEISFRYNGTQQKFSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVFKAAQPLDLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVRASKETVTREICDLLTDQ. : DMALPADPT  
ADAC_MOUSE                            : SEDNFARFVCKNNGVLFENQLLQIGLKSEFRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLNLQTKPVDPTVDGGAQVQQVVNIECISDFTEAPVLNIQFRYGGTFQNVSVKLPITLNKFFQPTEMASQDFFQRWKQLSNPQQEVQNIFKAKHPMDTEITKAKIIGFGSALLEEVDPNPANFVVLGIIHTKTTQIGCLLRLEPNLQAQMYRLTLRTSKDTVSQRLCELLSEQ. : ADAC_MOUSE  
AB004536                              : ALPGFYRLCWKDKGILYQDSQIQIGVRSEYHNSEGAIYLYYENRQSNTLKSLSSTLIR...TFSTFHLATTFQDTNLPSGVQLQQKYVMSGVNEIFEPPIIHVSY.VTGVIRSIDLQLPVLLSKFMKPTIFDSYDFFNHWGQMG.VEREAQLTFGLNSKLDAKRLTKIVSGFHWGICQNVDSIALNIVGAGIIRFGTQNVGCLLRIEPNYEQNLIRLSIRSTNTSIANTLAKEMQEIL : AB004536  
CELT20B51                             : AKDDYLKFVTKSNAILWEDDYIQIGCKLETRNNLGRLGMFYGNKTSQPFNKFTPIITCPGALAVQLQAQAKPVEPVVAAGTQVQQLINFVCVQEFQKMPIMNIKFTFTDRAGAVQFYLPLFISKFFEPTNMTSEQFFTRWKSLGAASQEAQKIFNALSPIEHATIESRLKGFGANLLTDVDPNPDNYVCAGIIHTQTQQIGTLIRLEPNKQAKMYRLTIRSSKDTVVQTLVDLLGNQF : CELT20B51  
ADAA_MOUSE                            : ADELLNKFVCKNSGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFLPTVVHPGDLQTQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLLSVRFRYGGTAQSLTLKLPVTINKFFQPTEMAAQDFFQRWKQLSLPLQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCELLAQQ. : ADAA_MOUSE  
consv                                 : 7222518776-6498-877559---784-67884-38588-3-877557347466853---344572656615355827-6-8--4565288486345-682848-56433336465--8388--85--384755--57-4787-12775-36-3623388212543482--3459756--6562-6-76---5636588-8-8-9---275586--78-67555856397548566- : consv

                                      : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231----- :
OrigSeq                               : SEDNFARFVCKNNGVLFENQLLQIGLKSEFRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLNLQTKPVDPTVDGGAQVQQVINIECISDFTEAPVLNIQFRYGGTFQNVSVKLPITLNKFFQPTEMASQDFFQRWKQLSNPQQEVQNIFKAKHPMDTEITKAKIIGFGSALLEEVDPNPANFVGAGIIHTKTTQIGCLLRLEPNLQAQMYRLTLRTSKDTVSQRLCELLSEQF : OrigSeq

cons                                  : ----HHHEEE-----EEE---------HHHH----EEEEEE--------------EE----HHHHHHH-------------HHHHHEEEEHE--------EEEEEE------EEEEE---------------HHHHHHHHHH---HHHHHHHHHHH-----HHHHHHHHH-----EE---------EEEEEEEEE-----EEEEE----HHHHHHHHHHH----HHHHHHHHHHHH-- : cons

dsc                                   : ----HHHHH--------HHHHHH-------HHHHHHEEEEE------------------------EEE-------------HHHHHEEEE---HH-----EEEEE-------EEEEE---------------HHHHHHHHHH----HHHHHHHHH------HHHHHHHHH-----HH---------EEEEEEE-------EEEEE-----HHHHHEEEE------HHHHHHHHHH--- : dsc
mul                                   : -HH--HHHH------EH---HHH--HHH--H-----EEEE---------------EEE----HHHH-------E-------H-EEEEEEH---------HEEEEE--------EEEEE---H---------H-HHHHH----------HHHHHHH-----HHHHHHHH------HHHHH-------EEEEEEEE------EEEEEH----HHHEEEEEE-------H-HHHHHHHHH- : mul
nnssp                                 : -HHHHHHHH-----EEE-------------------EEEEE--------------EE---------EE-------------HHHHHHHHHHH--------EEEEEEE------EEEE---------------HHHHHHHHHHHH--HHHHHHHHHH-----HHHHHHHHH----------------EEEEEEE--------EEEEE--------EEEEEE----HHHHHHHHHHHHHH : nnssp
phd                                   : ------EEEEE----EEE-----E--HHHHH----EEEEEEE------E------EEE---HHHHHHH-------------EEEEEEEEEEE-------EEEEEEE----EEEEEEEEEEEEE---------HHHHHHHHHH---HHHHHHHHHHH------HHHHHHHH-----EEE--------EEEEEEEEEEEE-EEEEEE----HHHHHHHHHHH----HHHHHHHHHHHH-- : phd
pred                                  : -------EEE--------HHHHHHH--HHHHHH---EEEE--------------EEE-HHHHHHHHHHHHH---------HHHHHHHHHHH---------EEEEEE-------EEE--------------HHHHHHHHHHH----HHHHHHHHHHHH----HHHHHHHH-----------------------EEE----HHHHHH----HHHHHHHHHHH-----HHHHHHHHHH--- : pred
zpred                                 : HHHHHHHHH------EHHHHHHHHEEEEE------EEEEE------EEE------EEE----HHHHHH---EEEEE----HHEEEEEEEEEEH-----HHHEEEE-------EEEEEEEEEEEE-----HHHHHHHHH---------HHHHHHHH----HHHHHHHHHEEEE---EEEEE-----EEEEEEEEEE----EEEEEEE-HHHHHHEEEEEE------EEEHHHHHHHHHH : zpred


You                                   :: You

access                                : EEEEBBEBBBEEEBBBBEBEBBEBBBEBEB-EEBB-BBBBBE-EEB-EB-EBBBBBBBBEEBBBEBEBEBEEBEBBBEBEBEBEEBBBBEBBEEBBEBBBBBBBBEBEE-B-EBBBEBBBBBBEBBEBEEBBBEEBBE-BEEBEEEEEEBEEBBEB-EEBEBEBBEBEBBBBBBBBBEEBEEE-EEBBBBBBBBBEBEEBBBBBEBEEEEEBEBBEBBBEBBEEEBBEBBBEBBEEEB : access

PHD Rel                               : 9866433676147615411201122312775143516899826655201257961231352111232112356345645343578988742232579981689984164045788664245623478643226899999997297389999999526789725787556314422242359887742567999875311247774287559999998764377346999999999359 : PHD Rel
Pred Rel                              : 0077679955898966577788655605655867665695799889777789987676777688888886560887877778000988586866988997668556799878766607877665679997668888988676757688779899880999975780755566887677880099977568667770786600000070076789996875679765798997777000 : Predator Rel



  



Notes


- The Consensus (cons) has a real world sustained Q3 average accuracy of ca. 72.9%
- SRS links will only work for swissprot entries because OWL is not indexed @EBI


Key:
consv - Conservation number (-) = 0; (+) = 10
phd   - PHD prediction
dsc   - DSC prediction
pred  - PREDATOR prediction 
nnssp - NNSSP prediciton 
zpred - Zpred prediction 
mul   - Mulpred prediction

access - Solvent Accessibility

PHD Rel - PHD Reliability
PRED Rel - NNSSP Reliability