BLASTP 1.4.8MP [20-June-1995] [Build 18:43:14 Mar 21 1997] Reference: Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Query= T0068 Polygalacturonase, Erwinia carotovora subsp. carotovora (376 letters) Database: /homes/james/jpred//databases//owl2/owl2 240,636 sequences; 76,431,475 total letters. Searching..................................................done WARNING: -hspmax 100 was exceeded with 1 of the database sequences, with as many as 113 HSPs being found at one time. Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N pir|P26509|PGL2_ERWCA ENDO-POLYGALACTURONASE PRECURSO... 1927 2.4e-256 1 pir|M83222|ERWPLYGLNS ERWPLYGLNS NID: g148471 - Erwin... 1863 1.1e-247 1 pir|L32172|ERWPEH1 ERWPEH1 NID: g476011 - Erwinia ... 1858 5.0e-247 1 pir|P18192|PGL1_ERWCA ENDO-POLYGALACTURONASE PRECURSO... 1851 4.4e-246 1 pir|P20041|PGLR_BURSO POLYGALACTURONASE PRECURSOR (PG... 170 7.4e-86 7 pir|U73161|AVU73161 AVU73161 NID: g1621468 - Agroba... 150 1.5e-80 7 pir|U85788|BCU85788 BCU85788 NID: g1839179 - Burkho... 127 4.4e-28 6 pir|X97828|ATORF06 ATORF06 NID: g1495260 - thale c... 254 2.7e-26 2 pir|X98130|AT81KBGEN5 AT81KBGEN NID: g1402874 - thale... 254 9.9e-26 2 pir|P48978|PGLR_MALDO POLYGALACTURONASE PRECURSOR (EC... 217 1.5e-22 2 pir|P35336|PGLR_ACTCH POLYGALACTURONASE PRECURSOR (EC... 225 3.0e-22 2 pir|S71523|S71523 polygalacturonase (EC 3.2.1.15)... 216 2.0e-21 2 pir|P05117|PGLR_LYCES POLYGALACTURONASE 2A PRECURSOR ... 207 4.6e-20 3 pir|L06094|AVOPOLYGAL AVOPOLYGAL NID: g166950 - Perse... 211 1.2e-19 2 pir|Q02096|PGLR_PERAE POLYGALACTURONASE PRECURSOR (EC... 207 2.6e-19 1 pir|P43212|MPA2_CRYJA POSSIBLE POLYGALACTURONASE PREC... 203 4.2e-19 2 pir|JC2498|JC2498 second major allergen Cry j II ... 203 4.2e-19 2 pir|Z49971|BNSAC66 BNSAC66 NID: g1419407 - rape. 196 5.1e-18 2 pir|AC002339|ATAC0023394 ATAC002339 NID: g2335089 - thal... 197 5.9e-18 1 pir|X98373|BNENDPOLG BNENDPOLG NID: g1403140 - rape. 198 7.0e-18 2 pir|AC002292|AC00229211 AC002292 NID: g2252639 - thale ... 187 1.1e-17 2 pir|A28056|A28056 A28056 NID: g1247376 - Bermuda ... 164 2.6e-17 2 pir|P48979|PGLR_PRUPE POLYGALACTURONASE PRECURSOR (EC... 155 5.4e-17 3 pir|AJ002532|ATAJ2532 ATAJ2532 NID: g2597823 - thale ... 191 6.4e-17 2 pir|S32006|S32006 polygalacturonase - common tobacco 131 6.7e-17 3 pir|U60106|PSEPEHB PSEPEHB NID: g1469785 - Ralston... 71 2.1e-16 7 pir|AF001003|AF001003 AF001003 NID: g2459816 - tomato. 144 2.5e-16 3 pir|S32008|S32008 polygalacturonase - common tobacco 129 6.4e-16 3 pir|Q05967|PGLR_TOBAC POLYGALACTURONASE PRECURSOR (EC... 129 7.2e-16 3 pir|AC002505|ATAC00250528 ATAC002505 NID: g2739359 - thal... 147 7.7e-16 3 pir|AL021713|ATT9A211 ATT9A21 NID: g2832689 - thale c... 148 9.2e-16 3 pir|AF001002|AF001002 AF001002 NID: g2459814 - tomato. 142 1.2e-15 2 pir|U70481|LEU70481 LEU70481 NID: g1575706 - tomato. 142 1.2e-15 2 pir|AC002333|ATAC0023331 ATAC002333 NID: g2281081 - thal... 143 4.3e-15 3 pir|S57806|S57806 polygalacturonase precursor - t... 140 1.2e-14 2 pir|AF001001|AF001001 AF001001 NID: g2459812 - tomato. 135 1.7e-14 3 pir|AF000999|AF000999 AF000999 NID: g2459808 - tomato. 132 2.4e-14 3 pir|AF029230|AF029230 AF029230 NID: g2605890 - tomato. 139 3.3e-14 3 pir|P49062|PGL1_ARATH EXOPOLYGALACTURONASE CLONE GBGE... 121 4.8e-14 2 pir|AC002333|ATAC0023332 ATAC002333 NID: g2281081 - thal... 145 1.3e-13 3 pir|S72635|S72635 exo-poly-alpha-galacturonosidas... 81 7.1e-13 6 pir|P15922|PEHX_ERWCH EXO-POLY-ALPHA-D-GALACTURONOSID... 76 8.5e-13 5 pir|P35338|PGLS_MAIZE EXOPOLYGALACTURONASE PRECURSOR ... 112 9.1e-13 3 pir|P26216|PGLR_MAIZE EXOPOLYGALACTURONASE PRECURSOR ... 109 2.3e-12 3 pir|AC001229|F5I149 F5I14 NID: g2182285 - thale cress. 117 5.4e-12 3 pir|P27644|PGLR_AGRTU POLYGALACTURONASE (EC 3.2.1.15)... 97 1.8e-11 3 pir|U20431|MSU20431 MSU20431 NID: g668997 - alfalfa. 122 4.4e-11 3 pir|P35337|PGLR_BRANA POLYGALACTURONASE PRECURSOR (EC... 114 1.2e-10 3 pir|P41750|PGLB_ASPFL POLYGALACTURONASE B PRECURSOR (... 106 1.8e-10 4 pir|AC002342|ATAC0023424 ATAC002342 NID: g2660661 - thal... 139 5.7e-10 1 pir|Y13669|SCPG5 SCPG5 NID: g2196885 - Sclerotin... 72 6.0e-10 5 pir|AC002342|ATAC0023425 ATAC002342 NID: g2660661 - thal... 138 7.9e-10 1 pir|Q00359|PGLX_COCCA EXOPOLYGALACTURONASE PRECURSOR ... 84 1.8e-09 4 pir|S52006|S52006 polygalacturonase - upland cotton 95 2.3e-09 3 pir|U09805|GBU09805 GBU09805 NID: g606651 - sea-isl... 95 2.3e-09 3 pir|P24548|PGLR_OENOR EXOPOLYGALACTURONASE (EC 3.2.1.... 104 5.2e-09 3 pir|S62743|S62743 endopolygalacturonase 3 precurs... 73 9.5e-09 4 pir|S62742|S62742 endopolygalacturonase 2 precurs... 73 2.4e-08 4 pir|AC002333|ATAC002333 ATAC002333 NID: g2281081 - thal... 123 2.9e-08 2 pir|P26215|PGLR_COCCA POLYGALACTURONASE PRECURSOR (EC... 89 5.2e-08 2 pir|L12023|SCEEPG SCEEPG NID: g294843 - Sclerotin... 71 6.1e-08 4 pir|S34266|S34266 exopolygalacturonase (clone GBG... 93 9.3e-08 3 pir|P35339|PGLT_MAIZE EXOPOLYGALACTURONASE PRECURSOR ... 113 9.7e-08 3 pir|Q07181|PGLR_FUSMO POLYGALACTURONASE PRECURSOR (EC... 79 2.4e-07 3 pir|AJ000076|KMAJ76 KMAJ76 NID: g2597956 - Kluyvero... 64 7.5e-07 4 pir|U49710|CPU49710 CPU49710 NID: g1208809 - chesnu... 69 2.9e-06 4 pir|P49063|PGL2_ARATH EXOPOLYGALACTURONASE CLONE GBGA... 89 4.3e-06 2 pir|D79980|D79980 D79980 NID: g2815393 - Penicill... 79 5.3e-06 3 pir|P26214|PGL2_ASPNG POLYGALACTURONASE II PRECURSOR ... 85 6.5e-06 4 pir|Q00446|PGL1_COLLN ENDOPOLYGALACTURONASE 1 PRECURS... 85 1.7e-05 3 pir|P47180|PGLX_YEAST PROBABLE POLYGALACTURONASE YJR1... 58 3.1e-05 5 pir|D89650|D89650 D89650 NID: g2196456 - Geotrich... 87 3.7e-05 2 pir|X95457|CLPG2ENDO CLPG2ENDO NID: g2230786 - Colle... 83 9.4e-05 2 pir|Y10165|CPPG121 CPPG12 NID: g1752652 - ergot fu... 61 0.00011 3 pir|Q00293|PGLX_ASPTU EXOPOLYGALACTURONASE PRECURSOR ... 77 0.00012 4 pir|P26213|PGL1_ASPNG POLYGALACTURONASE I PRECURSOR (... 82 0.00013 2 pir|A39428|A39428 A39428 NID: g2295758 - Aspergil... 77 0.00015 4 pir|Y10165|CPPG12 CPPG12 NID: g1752652 - ergot fu... 69 0.00020 3 pir|U96456|FOU96456 FOU96456 NID: g2078554 - Fusari... 75 0.00033 2 pir|AB000124|AB000124 AB000124 NID: g2217912 - Fusari... 75 0.00033 2 pir|P19805|PGL2_ASPTU POLYGALACTURONASE II PRECURSOR ... 86 0.00047 3 pir|P41749|PGLA_ASPFL POLYGALACTURONASE A PRECURSOR (... 79 0.0038 2 pir|P35335|PGLR_ASPOR POLYGALACTURONASE PRECURSOR (EC... 79 0.0038 2 pir|P49575|PGLR_ASPPA POLYGALACTURONASE PRECURSOR (EC... 79 0.0051 2 pir|S24156|S24156 polygalacturonase (EC 3.2.1.15)... 63 0.0062 3 pir|S30062|S30062 polygalacturonase - maize 68 0.011 2 pir|S30063|S30063 polygalacturonase - maize 66 0.024 2 Parameters: E=0.05 B=0 V=900 H=0 -ctxfactor=1.00 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.311 0.128 0.359 same same same Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 376 376 0.050 83 3 11 23 0.24 34 Statistics: Query Expected Observed HSPs HSPs Frame MatID High Score High Score Reportable Reported +0 0 70 (31.4 bits) 1927 (864.7 bits) 293 0 Query Neighborhd Word Excluded Failed Successful Overlaps Frame MatID Words Hits Hits Extensions Extensions Excluded +0 0 8001 58215101 11948428 46176214 90425 738 Database: /homes/james/jpred//databases//owl2/owl2 Release date: unknown Posted date: 10:04 AM BST Apr 7, 1998 # of letters in database: 76,431,475 # of sequences in database: 240,636 # of database sequences satisfying E: 87 No. of states in DFA: 566 (56 KB) Total size of DFA: 138 KB (192 KB) Time to generate neighborhood: 0.02u 0.00s 0.02t Real: 00:00:00 No. of processors used: 12 Time to search database: 120.71u 3.24s 123.95t Real: 00:00:19 Total cpu time: 120.77u 3.34s 124.11t Real: 00:00:19 WARNINGS ISSUED: 1