SILENT_MODE BLOCK_FILE jp_J2MhWWN.concise.blc MAX_NSEQ 797 MAX_INPUT_LEN 799 OUTPUT_FILE jp_J2MhWWN.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 153 786 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 787 153 796 H SPACE SUB_CHARS 1 787 153 796 E SPACE SUB_CHARS 1 787 153 796 - SPACE STRAND 122 790 127 COLOUR_TEXT_REGION 122 790 127 790 51 STRAND 141 790 144 COLOUR_TEXT_REGION 141 790 144 790 51 HELIX 19 790 27 COLOUR_TEXT_REGION 19 790 27 790 50 HELIX 32 790 42 COLOUR_TEXT_REGION 32 790 42 790 50 HELIX 47 790 54 COLOUR_TEXT_REGION 47 790 54 790 50 HELIX 58 790 77 COLOUR_TEXT_REGION 58 790 77 790 50 HELIX 84 790 92 COLOUR_TEXT_REGION 84 790 92 790 50 HELIX 97 790 104 COLOUR_TEXT_REGION 97 790 104 790 50 HELIX 109 790 117 COLOUR_TEXT_REGION 109 790 117 790 50 STRAND 122 795 127 COLOUR_TEXT_REGION 122 795 127 795 51 HELIX 19 795 27 COLOUR_TEXT_REGION 19 795 27 795 50 HELIX 33 795 42 COLOUR_TEXT_REGION 33 795 42 795 50 HELIX 47 795 53 COLOUR_TEXT_REGION 47 795 53 795 50 HELIX 58 795 76 COLOUR_TEXT_REGION 58 795 76 795 50 HELIX 84 795 93 COLOUR_TEXT_REGION 84 795 93 795 50 HELIX 97 795 104 COLOUR_TEXT_REGION 97 795 104 795 50 HELIX 108 795 117 COLOUR_TEXT_REGION 108 795 117 795 50 STRAND 109 796 116 COLOUR_TEXT_REGION 109 796 116 796 51 STRAND 121 796 127 COLOUR_TEXT_REGION 121 796 127 796 51 STRAND 141 796 145 COLOUR_TEXT_REGION 141 796 145 796 51 HELIX 19 796 27 COLOUR_TEXT_REGION 19 796 27 796 50 HELIX 31 796 42 COLOUR_TEXT_REGION 31 796 42 796 50 HELIX 47 796 54 COLOUR_TEXT_REGION 47 796 54 796 50 HELIX 58 796 78 COLOUR_TEXT_REGION 58 796 78 796 50 HELIX 84 796 92 COLOUR_TEXT_REGION 84 796 92 796 50 HELIX 97 796 103 COLOUR_TEXT_REGION 97 796 103 796 50