SILENT_MODE BLOCK_FILE jp_OlE8gmr.concise.blc MAX_NSEQ 836 MAX_INPUT_LEN 838 OUTPUT_FILE jp_OlE8gmr.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 226 825 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 826 226 835 H SPACE SUB_CHARS 1 826 226 835 E SPACE SUB_CHARS 1 826 226 835 - SPACE STRAND 29 829 33 COLOUR_TEXT_REGION 29 829 33 829 51 STRAND 49 829 49 COLOUR_TEXT_REGION 49 829 49 829 51 STRAND 104 829 105 COLOUR_TEXT_REGION 104 829 105 829 51 STRAND 129 829 133 COLOUR_TEXT_REGION 129 829 133 829 51 STRAND 149 829 154 COLOUR_TEXT_REGION 149 829 154 829 51 STRAND 168 829 170 COLOUR_TEXT_REGION 168 829 170 829 51 STRAND 183 829 189 COLOUR_TEXT_REGION 183 829 189 829 51 STRAND 194 829 201 COLOUR_TEXT_REGION 194 829 201 829 51 HELIX 48 829 48 COLOUR_TEXT_REGION 48 829 48 829 50 HELIX 55 829 62 COLOUR_TEXT_REGION 55 829 62 829 50 HELIX 89 829 95 COLOUR_TEXT_REGION 89 829 95 829 50 HELIX 117 829 125 COLOUR_TEXT_REGION 117 829 125 829 50 HELIX 136 829 145 COLOUR_TEXT_REGION 136 829 145 829 50 HELIX 159 829 161 COLOUR_TEXT_REGION 159 829 161 829 50 HELIX 205 829 213 COLOUR_TEXT_REGION 205 829 213 829 50 HELIX 216 829 224 COLOUR_TEXT_REGION 216 829 224 829 50 STRAND 3 834 3 COLOUR_TEXT_REGION 3 834 3 834 51 STRAND 29 834 33 COLOUR_TEXT_REGION 29 834 33 834 51 STRAND 42 834 43 COLOUR_TEXT_REGION 42 834 43 834 51 STRAND 48 834 49 COLOUR_TEXT_REGION 48 834 49 834 51 STRAND 64 834 64 COLOUR_TEXT_REGION 64 834 64 834 51 STRAND 103 834 106 COLOUR_TEXT_REGION 103 834 106 834 51 STRAND 129 834 133 COLOUR_TEXT_REGION 129 834 133 834 51 STRAND 150 834 154 COLOUR_TEXT_REGION 150 834 154 834 51 STRAND 168 834 169 COLOUR_TEXT_REGION 168 834 169 834 51 STRAND 183 834 189 COLOUR_TEXT_REGION 183 834 189 834 51 STRAND 194 834 201 COLOUR_TEXT_REGION 194 834 201 834 51 HELIX 55 834 63 COLOUR_TEXT_REGION 55 834 63 834 50 HELIX 91 834 96 COLOUR_TEXT_REGION 91 834 96 834 50 HELIX 116 834 125 COLOUR_TEXT_REGION 116 834 125 834 50 HELIX 136 834 145 COLOUR_TEXT_REGION 136 834 145 834 50 HELIX 159 834 162 COLOUR_TEXT_REGION 159 834 162 834 50 HELIX 205 834 213 COLOUR_TEXT_REGION 205 834 213 834 50 HELIX 216 834 224 COLOUR_TEXT_REGION 216 834 224 834 50 STRAND 29 835 33 COLOUR_TEXT_REGION 29 835 33 835 51 STRAND 129 835 133 COLOUR_TEXT_REGION 129 835 133 835 51 STRAND 148 835 154 COLOUR_TEXT_REGION 148 835 154 835 51 STRAND 168 835 171 COLOUR_TEXT_REGION 168 835 171 835 51 STRAND 176 835 176 COLOUR_TEXT_REGION 176 835 176 835 51 STRAND 184 835 188 COLOUR_TEXT_REGION 184 835 188 835 51 STRAND 194 835 201 COLOUR_TEXT_REGION 194 835 201 835 51 HELIX 47 835 51 COLOUR_TEXT_REGION 47 835 51 835 50 HELIX 89 835 95 COLOUR_TEXT_REGION 89 835 95 835 50 HELIX 120 835 124 COLOUR_TEXT_REGION 120 835 124 835 50 HELIX 136 835 145 COLOUR_TEXT_REGION 136 835 145 835 50 HELIX 205 835 213 COLOUR_TEXT_REGION 205 835 213 835 50 HELIX 217 835 224 COLOUR_TEXT_REGION 217 835 224 835 50