SILENT_MODE BLOCK_FILE jp_CtL7PAv.concise.blc MAX_NSEQ 740 MAX_INPUT_LEN 742 OUTPUT_FILE jp_CtL7PAv.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 527 729 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 730 527 739 H SPACE SUB_CHARS 1 730 527 739 E SPACE SUB_CHARS 1 730 527 739 - SPACE STRAND 60 733 70 COLOUR_TEXT_REGION 60 733 70 733 51 STRAND 95 733 99 COLOUR_TEXT_REGION 95 733 99 733 51 STRAND 137 733 137 COLOUR_TEXT_REGION 137 733 137 733 51 STRAND 145 733 149 COLOUR_TEXT_REGION 145 733 149 733 51 STRAND 159 733 163 COLOUR_TEXT_REGION 159 733 163 733 51 STRAND 194 733 197 COLOUR_TEXT_REGION 194 733 197 733 51 STRAND 201 733 208 COLOUR_TEXT_REGION 201 733 208 733 51 STRAND 234 733 240 COLOUR_TEXT_REGION 234 733 240 733 51 STRAND 266 733 270 COLOUR_TEXT_REGION 266 733 270 733 51 STRAND 306 733 313 COLOUR_TEXT_REGION 306 733 313 733 51 STRAND 318 733 321 COLOUR_TEXT_REGION 318 733 321 733 51 STRAND 330 733 334 COLOUR_TEXT_REGION 330 733 334 733 51 STRAND 348 733 354 COLOUR_TEXT_REGION 348 733 354 733 51 STRAND 385 733 390 COLOUR_TEXT_REGION 385 733 390 733 51 STRAND 415 733 415 COLOUR_TEXT_REGION 415 733 415 733 51 STRAND 439 733 443 COLOUR_TEXT_REGION 439 733 443 733 51 STRAND 449 733 451 COLOUR_TEXT_REGION 449 733 451 733 51 STRAND 460 733 462 COLOUR_TEXT_REGION 460 733 462 733 51 STRAND 475 733 477 COLOUR_TEXT_REGION 475 733 477 733 51 STRAND 493 733 496 COLOUR_TEXT_REGION 493 733 496 733 51 HELIX 20 733 32 COLOUR_TEXT_REGION 20 733 32 733 50 HELIX 37 733 47 COLOUR_TEXT_REGION 37 733 47 733 50 HELIX 75 733 85 COLOUR_TEXT_REGION 75 733 85 733 50 HELIX 115 733 132 COLOUR_TEXT_REGION 115 733 132 733 50 HELIX 150 733 150 COLOUR_TEXT_REGION 150 733 150 733 50 HELIX 171 733 178 COLOUR_TEXT_REGION 171 733 178 733 50 HELIX 182 733 193 COLOUR_TEXT_REGION 182 733 193 733 50 HELIX 216 733 228 COLOUR_TEXT_REGION 216 733 228 733 50 HELIX 273 733 281 COLOUR_TEXT_REGION 273 733 281 733 50 HELIX 287 733 296 COLOUR_TEXT_REGION 287 733 296 733 50 HELIX 363 733 377 COLOUR_TEXT_REGION 363 733 377 733 50 HELIX 394 733 402 COLOUR_TEXT_REGION 394 733 402 733 50 HELIX 404 733 414 COLOUR_TEXT_REGION 404 733 414 733 50 HELIX 465 733 474 COLOUR_TEXT_REGION 465 733 474 733 50 STRAND 60 738 64 COLOUR_TEXT_REGION 60 738 64 738 51 STRAND 67 738 70 COLOUR_TEXT_REGION 67 738 70 738 51 STRAND 95 738 99 COLOUR_TEXT_REGION 95 738 99 738 51 STRAND 144 738 150 COLOUR_TEXT_REGION 144 738 150 738 51 STRAND 159 738 163 COLOUR_TEXT_REGION 159 738 163 738 51 STRAND 193 738 197 COLOUR_TEXT_REGION 193 738 197 738 51 STRAND 201 738 209 COLOUR_TEXT_REGION 201 738 209 738 51 STRAND 234 738 240 COLOUR_TEXT_REGION 234 738 240 738 51 STRAND 265 738 270 COLOUR_TEXT_REGION 265 738 270 738 51 STRAND 306 738 313 COLOUR_TEXT_REGION 306 738 313 738 51 STRAND 318 738 322 COLOUR_TEXT_REGION 318 738 322 738 51 STRAND 330 738 334 COLOUR_TEXT_REGION 330 738 334 738 51 STRAND 348 738 355 COLOUR_TEXT_REGION 348 738 355 738 51 STRAND 385 738 390 COLOUR_TEXT_REGION 385 738 390 738 51 STRAND 439 738 443 COLOUR_TEXT_REGION 439 738 443 738 51 STRAND 460 738 462 COLOUR_TEXT_REGION 460 738 462 738 51 STRAND 473 738 478 COLOUR_TEXT_REGION 473 738 478 738 51 STRAND 494 738 496 COLOUR_TEXT_REGION 494 738 496 738 51 STRAND 515 738 517 COLOUR_TEXT_REGION 515 738 517 738 51 HELIX 20 738 32 COLOUR_TEXT_REGION 20 738 32 738 50 HELIX 37 738 47 COLOUR_TEXT_REGION 37 738 47 738 50 HELIX 75 738 85 COLOUR_TEXT_REGION 75 738 85 738 50 HELIX 115 738 132 COLOUR_TEXT_REGION 115 738 132 738 50 HELIX 168 738 179 COLOUR_TEXT_REGION 168 738 179 738 50 HELIX 182 738 189 COLOUR_TEXT_REGION 182 738 189 738 50 HELIX 216 738 228 COLOUR_TEXT_REGION 216 738 228 738 50 HELIX 251 738 257 COLOUR_TEXT_REGION 251 738 257 738 50 HELIX 259 738 262 COLOUR_TEXT_REGION 259 738 262 738 50 HELIX 273 738 281 COLOUR_TEXT_REGION 273 738 281 738 50 HELIX 288 738 296 COLOUR_TEXT_REGION 288 738 296 738 50 HELIX 362 738 377 COLOUR_TEXT_REGION 362 738 377 738 50 HELIX 393 738 402 COLOUR_TEXT_REGION 393 738 402 738 50 HELIX 404 738 415 COLOUR_TEXT_REGION 404 738 415 738 50 HELIX 465 738 472 COLOUR_TEXT_REGION 465 738 472 738 50 STRAND 4 739 5 COLOUR_TEXT_REGION 4 739 5 739 51 STRAND 60 739 68 COLOUR_TEXT_REGION 60 739 68 739 51 STRAND 95 739 98 COLOUR_TEXT_REGION 95 739 98 739 51 STRAND 103 739 103 COLOUR_TEXT_REGION 103 739 103 739 51 STRAND 137 739 137 COLOUR_TEXT_REGION 137 739 137 739 51 STRAND 158 739 163 COLOUR_TEXT_REGION 158 739 163 739 51 STRAND 176 739 176 COLOUR_TEXT_REGION 176 739 176 739 51 STRAND 200 739 207 COLOUR_TEXT_REGION 200 739 207 739 51 STRAND 234 739 240 COLOUR_TEXT_REGION 234 739 240 739 51 STRAND 267 739 268 COLOUR_TEXT_REGION 267 739 268 739 51 STRAND 306 739 312 COLOUR_TEXT_REGION 306 739 312 739 51 STRAND 316 739 318 COLOUR_TEXT_REGION 316 739 318 739 51 STRAND 330 739 335 COLOUR_TEXT_REGION 330 739 335 739 51 STRAND 349 739 352 COLOUR_TEXT_REGION 349 739 352 739 51 STRAND 385 739 390 COLOUR_TEXT_REGION 385 739 390 739 51 STRAND 394 739 397 COLOUR_TEXT_REGION 394 739 397 739 51 STRAND 413 739 415 COLOUR_TEXT_REGION 413 739 415 739 51 STRAND 438 739 442 COLOUR_TEXT_REGION 438 739 442 739 51 STRAND 448 739 452 COLOUR_TEXT_REGION 448 739 452 739 51 STRAND 459 739 463 COLOUR_TEXT_REGION 459 739 463 739 51 STRAND 493 739 496 COLOUR_TEXT_REGION 493 739 496 739 51 HELIX 20 739 32 COLOUR_TEXT_REGION 20 739 32 739 50 HELIX 37 739 47 COLOUR_TEXT_REGION 37 739 47 739 50 HELIX 69 739 70 COLOUR_TEXT_REGION 69 739 70 739 50 HELIX 76 739 85 COLOUR_TEXT_REGION 76 739 85 739 50 HELIX 113 739 132 COLOUR_TEXT_REGION 113 739 132 739 50 HELIX 146 739 154 COLOUR_TEXT_REGION 146 739 154 739 50 HELIX 184 739 197 COLOUR_TEXT_REGION 184 739 197 739 50 HELIX 217 739 228 COLOUR_TEXT_REGION 217 739 228 739 50 HELIX 273 739 280 COLOUR_TEXT_REGION 273 739 280 739 50 HELIX 287 739 295 COLOUR_TEXT_REGION 287 739 295 739 50 HELIX 336 739 337 COLOUR_TEXT_REGION 336 739 337 739 50 HELIX 365 739 377 COLOUR_TEXT_REGION 365 739 377 739 50 HELIX 398 739 399 COLOUR_TEXT_REGION 398 739 399 739 50 HELIX 404 739 410 COLOUR_TEXT_REGION 404 739 410 739 50 HELIX 412 739 412 COLOUR_TEXT_REGION 412 739 412 739 50 HELIX 466 739 475 COLOUR_TEXT_REGION 466 739 475 739 50