QUERY : EYFTLQIRGRERFEMFRELNEALELKDAQAG : QUERY
UniRef90_Q29537 : EYFTLQIRGRERYEMFRNLNEALELKDAQSG : UniRef90_Q29537
UniRef90_W8FSP6 : EYFTLQIRGRERFEMLREINEALELKDAMAG : UniRef90_W8FSP6
UniRef90_L5JZ91 : EYFTLQIRGRKNFEILRELNEALELKDAQAG : UniRef90_L5JZ91
UniRef90_G3WS63 : EYFTLQIRGRHRYELLRELNEALELKEAHSG : UniRef90_G3WS63
UniRef90_P67939 : EYFTLQIRGFKRYEMFRELNDALELKDALDG : UniRef90_P67939
UniRef90_G3UI57 : KYFTLKIRGHECFKMFLELNEALELKDAQAG : UniRef90_G3UI57
UniRef90_Q0GMA7 : ETFTLQIHGRERYEMFKKLNEALELKD---- : UniRef90_Q0GMA7
UniRef90_S7NG87 : EYFTLQIRGRERFETFRKLNEALELQD---- : UniRef90_S7NG87
UniRef90_UPI0003C290A9 : EIFTLQIRGHERYEMFKKLNEGLEALDGQEA : UniRef90_UPI0003C290A9
UniRef90_Q9EPP9 : --FTLKIRGRERFEMFRELNEALELKDARAA : UniRef90_Q9EPP9
UniRef90_W5N8V4 : EIFTLQVRGRERFEMLKKINESLELKD---- : UniRef90_W5N8V4
UniRef90_UPI0003F07B89 : EYFTLQIRGYKRFRMFQELNEALEMKDAAD- : UniRef90_UPI0003F07B89
UniRef90_UPI0003C161D6 : ELYSLQVRGRERYEMFKKLNNALELQDSVSA : UniRef90_UPI0003C161D6
UniRef90_P10360 : EIFYLQVRGRRRYEMLKEINEALQLAEGGSA : UniRef90_P10360
UniRef90_P79734 : EIFTLQVRGRERYEILKKLNDSLELSDVVPA : UniRef90_P79734
UniRef90_P07193 : EIFTLRIKGRSRYEMIKKLNDALELQES--- : UniRef90_P07193
UniRef90_A9XR54 : EVFTLHVRGRERYEMLKKINAGLELLD---- : UniRef90_A9XR54
UniRef90_UPI0004448B86 : ELYTLQIRGRERFLMFKKLNDGLELMEKMG- : UniRef90_UPI0004448B86
UniRef90_UPI0004543DE3 : -----QIRGRERYEMFRTMNEAFEFKDAKGG : UniRef90_UPI0004543DE3
UniRef90_W5KI53 : EVFVLHVRGKERFNMLKKINDSLELMDAM-- : UniRef90_W5KI53
UniRef90_P25035 : EIYTLQIRGKEKYEMLKKFNDSLELSE---- : UniRef90_P25035
UniRef90_G1U940 : EYCIIKIRGRECFKVFQELNEVLELKDAKA- : UniRef90_G1U940
UniRef90_F8RKR1 : DVFVLHVRGRERFEMLKKINDGLELLDKES- : UniRef90_F8RKR1
UniRef90_H3CXQ0 : EVFTLQIRGRKRYEMIKRINDGLDLLE---- : UniRef90_H3CXQ0
UniRef90_Q4H301 : EEFTLKIRGRDKFEMLKKIKEALDLAEVAA- : UniRef90_Q4H301
UniRef90_G3UK14 : -YFTLQIHGH----MFLKLNEALELKDAQAG : UniRef90_G3UK14
UniRef90_F5A7P3 : EIYTLQVHGRERYEFLKKINDGLEFSD---- : UniRef90_F5A7P3
UniRef90_G9J1L8 : EVFTLQVTGRERYETLKQINESLEVQE---- : UniRef90_G9J1L8
UniRef90_A5JSV4 : EVFHLPIVGRGRYEMFKKINEGLELLD---- : UniRef90_A5JSV4
UniRef90_C0PUM1 : -VFLLQVRGREHYEWLKKINDSLELMD---- : UniRef90_C0PUM1
UniRef90_K7G3P4 : EVFCLEVHGRENYEMLKKINNALEVAAAR-- : UniRef90_K7G3P4
UniRef90_Q92143 : EIYTLSIRGRNRYLWFKSLNDGLELMD---- : UniRef90_Q92143
UniRef90_G3Q6V4 : DVFVLRVRGRERYEWLKKIHDGLELLD---- : UniRef90_G3Q6V4
UniRef90_UPI0003890036 : EVFLLEVHGRKRYMMLKEINDALEMVAAK-- : UniRef90_UPI0003890036
UniRef90_P79820 : EVFHFEVYGRERYEFLKKINDGLELLEKES- : UniRef90_P79820
: 1---------11--------21-------- :
OrigSeq : EYFTLQIRGRERFEMFRELNEALELKDAQAG : OrigSeq
Jnet : -EEEEEEE--HHHHHHHHHHHHHHHHH---- : Jnet
jhmm : --EEEEEE--HHHHHHHHHHHHHHHH----- : jhmm
jpssm : -EEEEEEE--HHHHHHHHHHHHHHHHHH--- : jpssm
Lupas 14 : ------------------------------- : Lupas 14
Lupas 21 : ------------------------------- : Lupas 21
Lupas 28 : ------------------------------- : Lupas 28
Jnet_25 : --BBB-B-B--BB-BB--B--BB-B------ : Jnet_25
Jnet_5 : ----B-B--------B--B------------ : Jnet_5
Jnet_0 : ------------------------------- : Jnet_0
Jnet Rel : 8078887353178999998589999832599 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.