QUERY : LDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQ : QUERY
UniRef90_G2FWX0 : LDSDWLKLVEEAMNSGVSKEQFREFLEFNKWRNTK : UniRef90_G2FWX0
UniRef90_UPI0004006A78 : LDSEWMQLVHEAMESGVSKEQFKEFLEFNKWRLNQ : UniRef90_UPI0004006A78
UniRef90_UPI00035DE0E2 : LDSEWIKIVKEAMDSGITKEQFREYLEFNKWRANQ : UniRef90_UPI00035DE0E2
UniRef90_U5L4E7 : LDSEWMNIVKEAMDSGISKDQFREFLEFNKWRINQ : UniRef90_U5L4E7
UniRef90_UPI00037FD403 : MDSEWIKLVKEAMHSGVSKEQFREFLEFNKWKQQK : UniRef90_UPI00037FD403
UniRef90_I0JRY8 : LDDDWLELVHEAMNSGVSKDQFREYLEFNKWKIHQ : UniRef90_I0JRY8
UniRef90_W1SMR1 : LDSDWMNLVQEAMNSGVSKEQFRDYLEFNKWRNKQ : UniRef90_W1SMR1
UniRef90_W4QT75 : LDSSWVELVREAMDSGITKDQFREYLEFNKWKNKQ : UniRef90_W4QT75
UniRef90_UPI00047E13DA : LDPAWLGLVREAMESGVSKQQFREFLEFQKWRKQN : UniRef90_UPI00047E13DA
UniRef90_E6TWV7 : IDKEWVNLVQEAMNSGVSKEEFRDFLEFNKWKMKQ : UniRef90_E6TWV7
UniRef90_UPI000360B5FC : LDEEWKQLVYDAMDSGVSKEQFREFLEFNKWRKEQ : UniRef90_UPI000360B5FC
UniRef90_N0ANC3 : LDPGWISLVKDAMESGITKDQFREYLEFNKWKINQ : UniRef90_N0ANC3
UniRef90_UPI00040196CC : LDAEWAELVKEAMNSGVSKEQFKEFLEFNKWKNQH : UniRef90_UPI00040196CC
UniRef90_UPI000364D6A1 : LDHDWEELVREAMSSGISKEEFREFLEFNKWKMKN : UniRef90_UPI000364D6A1
UniRef90_Q8ENF9 : LDEEWMQIVQEAMKSGVSKEQFKEYLEFNKWRQKN : UniRef90_Q8ENF9
UniRef90_W4RHK8 : MDSDWVNLVKEAMDSGITKDQFREFLEFNKWRLHN : UniRef90_W4RHK8
UniRef90_UPI0003725E78 : LDGEWLALVREAMESGISKEQFLEFLQYNKWRMNR : UniRef90_UPI0003725E78
UniRef90_UPI00047EF5C2 : LDTAWIEIVKEAMESGVSKEQFREYLEFNKWRSKQ : UniRef90_UPI00047EF5C2
UniRef90_UPI0002D76FEB : LDSEWLSIVEEAMKSGVSKEQFREFIEFNKWKLKN : UniRef90_UPI0002D76FEB
UniRef90_J8TS72 : LDPNWIELVQDAMNSGISKEQFREYLDFVKWKNKQ : UniRef90_J8TS72
UniRef90_R9C519 : LDSEWLKIVKEAMDSGVSKKEFREFLEFNRWRLQQ : UniRef90_R9C519
UniRef90_UPI00026260DD : LDGEWLQIVREAMDSGVSKEQFKEYLDFYKWRNQQ : UniRef90_UPI00026260DD
UniRef90_UPI00036C189C : VDEEWYELIEEAMKSGVSKEQFREFLEYNKWRINR : UniRef90_UPI00036C189C
UniRef90_UPI0001E89CD0 : LDREWATLVKEAMDSGVTKDQFREFLEFNKWKINQ : UniRef90_UPI0001E89CD0
UniRef90_UPI000479E229 : LDSDWMKIMAEAMASGVTKEQFREFIEFNKWRQKK : UniRef90_UPI000479E229
UniRef90_I8J1L1 : LDHDWTKLVKEAMDSGISKEQFKEFLEYNKWKND- : UniRef90_I8J1L1
UniRef90_UPI0003624D0E : LDAEWEQLVIEAMNSGVSKEEFREFLEFNKWKLHR : UniRef90_UPI0003624D0E
UniRef90_G7VPQ2 : LDPEWWELVQEAMASGVSKKEFKDFLEYQKWKMGQ : UniRef90_G7VPQ2
UniRef90_W4CQZ7 : LDSEWFRLVQEAMDSGISKREFKEFLDYQKWKLDQ : UniRef90_W4CQZ7
UniRef90_UPI00041227C4 : LDGEWLKIVKEAMQSGVTKEEFKDFLEFNKWRKNQ : UniRef90_UPI00041227C4
UniRef90_K2GAK9 : LDDEWVNLVKDAMSSGLSKEQFKDYLEFNKWKLNK : UniRef90_K2GAK9
UniRef90_K6DLE0 : LDPEWIKLAQEAAESGVSKEQFREFLEFTKWQIEQ : UniRef90_K6DLE0
UniRef90_UPI000289D51F : LDSDWAQLVQEAMKSGVSKEEFKAFLEFNKWKNTN : UniRef90_UPI000289D51F
UniRef90_UPI000379027B : LDEEWLKLAEEAMHSGVSKQEFKEFLEFNKWKQNH : UniRef90_UPI000379027B
UniRef90_UPI000472C214 : LDIEWLELAKEAMDSGISKEQFKQYLEFQKWQKS- : UniRef90_UPI000472C214
UniRef90_UPI0001850A1C : VDPDWLDIVHQAQDSGITKEQFKEFIEFNKWRKNQ : UniRef90_UPI0001850A1C
UniRef90_Q9KB11 : LDEDWKKLVKEAMESGISKDQFKEYLEFQKWKSQQ : UniRef90_Q9KB11
UniRef90_J9H8X8 : LDREWLELLREVADAGITKEQFREWLEFQRWRLDK : UniRef90_J9H8X8
UniRef90_X4ZEA9 : -DLEWNELIKEAMHSGISKREFRDFLEYNKWRMER : UniRef90_X4ZEA9
UniRef90_U5L7U6 : LDPEWLGLVQEAIDQGITKEDFSYYLDFIRFKNTH : UniRef90_U5L7U6
UniRef90_UPI000403D189 : IDSEWMEILQEAINSGIPKDELLKFIEFNKYKQGK : UniRef90_UPI000403D189
UniRef90_W4Q9D0 : LDEEWLQLAKEAQNSGISKQQFVEYLEFTKWQKQK : UniRef90_W4Q9D0
UniRef90_W4QB24 : --GEWLEIIQDAINEGITKEQFAEFLEFQRWKQEK : UniRef90_W4QB24
UniRef90_UPI00047AD0ED : LDEEWVSLVKEAIRQGVTKEDFAYYLEFIKFKK-- : UniRef90_UPI00047AD0ED
UniRef90_UPI0004029FBB : LDEKWLEVVREAMSSYVSKEQFKEFLDAKKREKER : UniRef90_UPI0004029FBB
UniRef90_UPI0003FDC08C : LDTEWLALVETAMDSGVTKEAFRRFLE-------- : UniRef90_UPI0003FDC08C
UniRef90_UPI000409D7A8 : LDEEWVGLIQEAIREGVSKEQFKDFQEYIRYKN-- : UniRef90_UPI000409D7A8
UniRef90_R9C5V7 : IDEDWISLVEEAIEDGITKEDFAGILEYVKFKKRQ : UniRef90_R9C5V7
UniRef90_UPI0002E34F06 : VDNEWVEILKELKELGIGKEQLREYLEFIKWRNQQ : UniRef90_UPI0002E34F06
UniRef90_K6DAF9 : LDEEWKALIQQAMENGVKKEDFRDYLQFQSWLKEQ : UniRef90_K6DAF9
UniRef90_UPI0001E89CD5 : LDEEWRRLVQRAIAEGLSKEDFKEYMEFQKWQGTK : UniRef90_UPI0001E89CD5
UniRef90_UPI0004791F50 : LDKEWEGLFQKAIDEGMSKDDFRDLLEYVKFKN-- : UniRef90_UPI0004791F50
: 1---------11--------21--------31--- :
OrigSeq : LDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQ : OrigSeq
Jnet : --HHHHHHHHHHHH----HHHHHHHHHHHHHH--- : Jnet
jhmm : --HHHHHHHHHHHH----HHHHHHHHHHHHHH--- : jhmm
jpssm : --HHHHHHHHHHHH----HHHHHHHHHHHHHH--- : jpssm
Lupas 14 : ----------------------------------- : Lupas 14
Lupas 21 : ----------------------------------- : Lupas 21
Lupas 28 : ----------------------------------- : Lupas 28
Jnet_25 : B---BB-BB--BB---B----B--BB-B--B---- : Jnet_25
Jnet_5 : ----B---B--B---------B------------- : Jnet_5
Jnet_0 : --------B------------B------------- : Jnet_0
Jnet Rel : 98369999999874488668999999999874599 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.