JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_RyfPC5u.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH jnetpred Final secondary structure prediction by Jnet |||||||E|E|E|E|E|||||E|E|E|E|E|E|||H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|||||||||||||E|E|E|E|E||||||||||||||E|E|E|E|E|E|E|E||||||E|E|E|E|||||H|H|H|H|H|H|H|H|H||||E|E|E|E|E|E||||||E|E|E|E|E|E||||E|E|E|E||||||||||H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|||||||||E|E|E|E|E|E|E||||||||||||H|H|H|H|H|||||E|E|E|E|E|E|||||||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 9|9|9|8|8|6|1|6|8|9|8|5|4|8|8|6|5|8|9|8|7|4|4|6|5|7|7|7|6|4|1|7|8|8|1|3|5|8|8|9|8|8|8|6|0|4|6|7|7|7|7|7|7|7|7|3|5|7|8|7|4|3|6|7|7|7|7|5|6|6|5|2|1|1|1|0|2|3|4|4|5|0|4|7|7|7|2|3|3|2|0|2|4|5|4|1|4|8|7|7|7|6|3|1|7|8|3|5|8|8|8|6|2|2|8|8|5|0|8|9|9|8|6|0|5|7|1|1|3|2|1|1|7|6|5|6|7|7|6|3|7|8|9|9|9|9|9|9|8|8|6|1|6|6|5|0|8|8|8|8|6|3|7|8|8|8|5|2|0|1|5|2|0|4|3|1|3|5|7|7|7|7|7|7|7|6|4|2|2|1|1|1|3|8|7|1|7|9|9|9|8|5|3|6|7|7|8|8|8|9 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off B|-|B|B|-|B|B|B|B|B|B|B|B|-|-|-|-|B|-|-|-|-|B|-|-|-|B|B|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|-|-|B|-|B|B|-|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|-|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|-|-|B|B|B|B|B|B|-|-|-|-|B|-|B|-|-|B|-|-|B|-|-|-|-|B|-|-|B|B|-|B|B|-|-|-|B|-|-|-|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|B|B|B|B|B|-|B|-|-|-|B|-|-|- NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|-|-|-|B|B|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|B|B|-|B|-|-|B|B|B|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|B|B|B|B|B|-|B|-|B|B|-|B|B|B|B|B|-|B|B|B|B|B|-|B|-|-|-|-|B|B|B|-|B|-|B|B|B|-|B|B|-|-|B|-|-|-|B|B|-|B|B|B|B|-|-|-|-|-|-|-|B|B|B|-|B|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|B|-|B|B|B|B|B|-|-|B|-|-|-|B|-|B|B|B|B|B|B|-|-|-|-|B|B|B|-|B|B|B|B|B|B|B|-|-|-|-|B|-|B|B|B|B|-|-|-|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|-|-|-|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|B|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|B|-|-|-|-|-|-|-|-|-|-|B|B|B|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|B|-|-|B|B|-|-|-|-|-|-|-|-|-|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles |||||||E|E|E|E|E|||||E|E|E|E|E|E|||H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|||||||||||||E|E|E|E|E||||||||||||||E|E|E|E|E|E|E||||||E|E|E|E|E|E||||H|H|H|H|H|H|H|H|H||||E|E|E|E|E|E|E|||||E|E|E|E|E|E|||E|E|E|E|E|E|||||||||H|H|H|H|H|H|H|H|H|H|H||||||E|E|E|E|E||||||||||E|E|E|E|E|E||||||||||||H|H|H|H|H|H||||E|E|E|E|E|E|||||||| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles ||||||E|E|E|E|E|E|||||E|E|E|E|E|E|||H|H|H|H|H|H||||||H|H|H|H|H|H|H|H|H|H||||||||||||E|E|E|E|E|||||||||||||||E|E|E|E|E|E|E||||||||||||||H|H|H|H|H|H|H|H|||||E|E|E|E|E||||||E|E|E|E|E|E|E|||||||||||||||||H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|||||||E|E|E|E|E|E|H|H|H||||||||||||E|E|E|E|E|||||E|E|E|E|E|E|||||||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree | | | | | |*| | | | | | | | | | | | | | | | | | | | | | | |*| | | |*| | | | | | | | | |*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*| | | | | | |*| | | | |*|*|*|*|*|*| | | | | | | | | | | |*| | | | | | | | |*|*| | | |*| | | | | | | | |*|*|*|*|*|*| | | | | | | | | | | | | | | | | | | | | | | |*| | | | | | | | | | | |*|*|*| | | |*|*|*| | | | | | | | | | | |*|*|*|*|*|*| | | | | | | | | | | | | | | | |