SILENT_MODE
BLOCK_FILE jp_g7IrjC7.concise.blc
MAX_NSEQ 959
MAX_INPUT_LEN 961
OUTPUT_FILE jp_g7IrjC7.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 102 948   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 949 102 958 H SPACE
SUB_CHARS 1 949 102 958 E SPACE
SUB_CHARS 1 949 102 958 - SPACE
HELIX 5 952 16
COLOUR_TEXT_REGION 5 952 16 952 50
HELIX 21 952 29
COLOUR_TEXT_REGION 21 952 29 952 50
HELIX 34 952 51
COLOUR_TEXT_REGION 34 952 51 952 50
HELIX 59 952 67
COLOUR_TEXT_REGION 59 952 67 952 50
HELIX 77 952 85
COLOUR_TEXT_REGION 77 952 85 952 50
HELIX 93 952 100
COLOUR_TEXT_REGION 93 952 100 952 50
HELIX 5 957 16
COLOUR_TEXT_REGION 5 957 16 957 50
HELIX 20 957 29
COLOUR_TEXT_REGION 20 957 29 957 50
HELIX 36 957 51
COLOUR_TEXT_REGION 36 957 51 957 50
HELIX 58 957 67
COLOUR_TEXT_REGION 58 957 67 957 50
HELIX 77 957 85
COLOUR_TEXT_REGION 77 957 85 957 50
HELIX 93 957 100
COLOUR_TEXT_REGION 93 957 100 957 50
HELIX 5 958 15
COLOUR_TEXT_REGION 5 958 15 958 50
HELIX 22 958 29
COLOUR_TEXT_REGION 22 958 29 958 50
HELIX 31 958 51
COLOUR_TEXT_REGION 31 958 51 958 50
HELIX 60 958 67
COLOUR_TEXT_REGION 60 958 67 958 50
HELIX 77 958 86
COLOUR_TEXT_REGION 77 958 86 958 50
HELIX 93 958 100
COLOUR_TEXT_REGION 93 958 100 958 50