SILENT_MODE BLOCK_FILE jp_j7w4N8u.concise.blc MAX_NSEQ 872 MAX_INPUT_LEN 874 OUTPUT_FILE jp_j7w4N8u.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 298 861 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 862 298 871 H SPACE SUB_CHARS 1 862 298 871 E SPACE SUB_CHARS 1 862 298 871 - SPACE STRAND 3 865 9 COLOUR_TEXT_REGION 3 865 9 865 51 STRAND 18 865 18 COLOUR_TEXT_REGION 18 865 18 865 51 STRAND 52 865 57 COLOUR_TEXT_REGION 52 865 57 865 51 STRAND 118 865 118 COLOUR_TEXT_REGION 118 865 118 865 51 STRAND 128 865 131 COLOUR_TEXT_REGION 128 865 131 865 51 STRAND 145 865 151 COLOUR_TEXT_REGION 145 865 151 865 51 STRAND 184 865 188 COLOUR_TEXT_REGION 184 865 188 865 51 STRAND 257 865 262 COLOUR_TEXT_REGION 257 865 262 865 51 STRAND 269 865 278 COLOUR_TEXT_REGION 269 865 278 865 51 HELIX 27 865 45 COLOUR_TEXT_REGION 27 865 45 865 50 HELIX 99 865 111 COLOUR_TEXT_REGION 99 865 111 865 50 HELIX 132 865 135 COLOUR_TEXT_REGION 132 865 135 865 50 HELIX 161 865 177 COLOUR_TEXT_REGION 161 865 177 865 50 HELIX 206 865 218 COLOUR_TEXT_REGION 206 865 218 865 50 HELIX 221 865 234 COLOUR_TEXT_REGION 221 865 234 865 50 HELIX 242 865 251 COLOUR_TEXT_REGION 242 865 251 865 50 HELIX 289 865 296 COLOUR_TEXT_REGION 289 865 296 865 50 STRAND 3 870 9 COLOUR_TEXT_REGION 3 870 9 870 51 STRAND 17 870 18 COLOUR_TEXT_REGION 17 870 18 870 51 STRAND 52 870 57 COLOUR_TEXT_REGION 52 870 57 870 51 STRAND 66 870 68 COLOUR_TEXT_REGION 66 870 68 870 51 STRAND 128 870 132 COLOUR_TEXT_REGION 128 870 132 870 51 STRAND 146 870 151 COLOUR_TEXT_REGION 146 870 151 870 51 STRAND 184 870 188 COLOUR_TEXT_REGION 184 870 188 870 51 STRAND 193 870 194 COLOUR_TEXT_REGION 193 870 194 870 51 STRAND 257 870 262 COLOUR_TEXT_REGION 257 870 262 870 51 STRAND 269 870 278 COLOUR_TEXT_REGION 269 870 278 870 51 HELIX 27 870 45 COLOUR_TEXT_REGION 27 870 45 870 50 HELIX 99 870 111 COLOUR_TEXT_REGION 99 870 111 870 50 HELIX 133 870 135 COLOUR_TEXT_REGION 133 870 135 870 50 HELIX 161 870 176 COLOUR_TEXT_REGION 161 870 176 870 50 HELIX 206 870 218 COLOUR_TEXT_REGION 206 870 218 870 50 HELIX 221 870 234 COLOUR_TEXT_REGION 221 870 234 870 50 HELIX 242 870 251 COLOUR_TEXT_REGION 242 870 251 870 50 HELIX 289 870 296 COLOUR_TEXT_REGION 289 870 296 870 50 STRAND 3 871 8 COLOUR_TEXT_REGION 3 871 8 871 51 STRAND 52 871 57 COLOUR_TEXT_REGION 52 871 57 871 51 STRAND 73 871 76 COLOUR_TEXT_REGION 73 871 76 871 51 STRAND 117 871 118 COLOUR_TEXT_REGION 117 871 118 871 51 STRAND 145 871 150 COLOUR_TEXT_REGION 145 871 150 871 51 STRAND 184 871 189 COLOUR_TEXT_REGION 184 871 189 871 51 STRAND 258 871 262 COLOUR_TEXT_REGION 258 871 262 871 51 STRAND 270 871 278 COLOUR_TEXT_REGION 270 871 278 871 51 HELIX 27 871 45 COLOUR_TEXT_REGION 27 871 45 871 50 HELIX 99 871 111 COLOUR_TEXT_REGION 99 871 111 871 50 HELIX 128 871 135 COLOUR_TEXT_REGION 128 871 135 871 50 HELIX 161 871 177 COLOUR_TEXT_REGION 161 871 177 871 50 HELIX 206 871 217 COLOUR_TEXT_REGION 206 871 217 871 50 HELIX 220 871 224 COLOUR_TEXT_REGION 220 871 224 871 50 HELIX 228 871 234 COLOUR_TEXT_REGION 228 871 234 871 50 HELIX 241 871 251 COLOUR_TEXT_REGION 241 871 251 871 50 HELIX 289 871 296 COLOUR_TEXT_REGION 289 871 296 871 50