SILENT_MODE BLOCK_FILE jp_Nju8Xn0.concise.blc MAX_NSEQ 969 MAX_INPUT_LEN 971 OUTPUT_FILE jp_Nju8Xn0.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 72 958 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 959 72 968 H SPACE SUB_CHARS 1 959 72 968 E SPACE SUB_CHARS 1 959 72 968 - SPACE STRAND 4 962 11 COLOUR_TEXT_REGION 4 962 11 962 51 STRAND 32 962 38 COLOUR_TEXT_REGION 32 962 38 962 51 STRAND 43 962 47 COLOUR_TEXT_REGION 43 962 47 962 51 HELIX 15 962 28 COLOUR_TEXT_REGION 15 962 28 962 50 HELIX 52 962 62 COLOUR_TEXT_REGION 52 962 62 962 50 HELIX 65 962 66 COLOUR_TEXT_REGION 65 962 66 962 50 STRAND 3 967 11 COLOUR_TEXT_REGION 3 967 11 967 51 STRAND 32 967 38 COLOUR_TEXT_REGION 32 967 38 967 51 STRAND 43 967 48 COLOUR_TEXT_REGION 43 967 48 967 51 STRAND 66 967 67 COLOUR_TEXT_REGION 66 967 67 967 51 HELIX 14 967 27 COLOUR_TEXT_REGION 14 967 27 967 50 HELIX 52 967 61 COLOUR_TEXT_REGION 52 967 61 967 50 STRAND 5 968 11 COLOUR_TEXT_REGION 5 968 11 968 51 STRAND 33 968 38 COLOUR_TEXT_REGION 33 968 38 968 51 STRAND 43 968 47 COLOUR_TEXT_REGION 43 968 47 968 51 HELIX 17 968 28 COLOUR_TEXT_REGION 17 968 28 968 50 HELIX 52 968 67 COLOUR_TEXT_REGION 52 968 67 968 50