SILENT_MODE
BLOCK_FILE jp_zn7vYQu.concise.blc
MAX_NSEQ 700
MAX_INPUT_LEN 702
OUTPUT_FILE jp_zn7vYQu.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 137 689   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 690 137 699 H SPACE
SUB_CHARS 1 690 137 699 E SPACE
SUB_CHARS 1 690 137 699 - SPACE
STRAND 5 693 11
COLOUR_TEXT_REGION 5 693 11 693 51
STRAND 33 693 36
COLOUR_TEXT_REGION 33 693 36 693 51
STRAND 57 693 62
COLOUR_TEXT_REGION 57 693 62 693 51
STRAND 87 693 91
COLOUR_TEXT_REGION 87 693 91 693 51
HELIX 15 693 29
COLOUR_TEXT_REGION 15 693 29 693 50
HELIX 43 693 52
COLOUR_TEXT_REGION 43 693 52 693 50
HELIX 68 693 80
COLOUR_TEXT_REGION 68 693 80 693 50
HELIX 103 693 112
COLOUR_TEXT_REGION 103 693 112 693 50
HELIX 123 693 133
COLOUR_TEXT_REGION 123 693 133 693 50
STRAND 5 698 11
COLOUR_TEXT_REGION 5 698 11 698 51
STRAND 33 698 36
COLOUR_TEXT_REGION 33 698 36 698 51
STRAND 57 698 62
COLOUR_TEXT_REGION 57 698 62 698 51
STRAND 87 698 91
COLOUR_TEXT_REGION 87 698 91 698 51
HELIX 15 698 29
COLOUR_TEXT_REGION 15 698 29 698 50
HELIX 43 698 52
COLOUR_TEXT_REGION 43 698 52 698 50
HELIX 68 698 80
COLOUR_TEXT_REGION 68 698 80 698 50
HELIX 105 698 113
COLOUR_TEXT_REGION 105 698 113 698 50
HELIX 123 698 133
COLOUR_TEXT_REGION 123 698 133 698 50
STRAND 5 699 10
COLOUR_TEXT_REGION 5 699 10 699 51
STRAND 33 699 36
COLOUR_TEXT_REGION 33 699 36 699 51
STRAND 56 699 61
COLOUR_TEXT_REGION 56 699 61 699 51
STRAND 87 699 91
COLOUR_TEXT_REGION 87 699 91 699 51
HELIX 15 699 29
COLOUR_TEXT_REGION 15 699 29 699 50
HELIX 43 699 52
COLOUR_TEXT_REGION 43 699 52 699 50
HELIX 69 699 80
COLOUR_TEXT_REGION 69 699 80 699 50
HELIX 102 699 111
COLOUR_TEXT_REGION 102 699 111 699 50
HELIX 123 699 133
COLOUR_TEXT_REGION 123 699 133 699 50