SILENT_MODE BLOCK_FILE jp_OaG5Kww.concise.blc MAX_NSEQ 1320 MAX_INPUT_LEN 1322 OUTPUT_FILE jp_OaG5Kww.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 162 1309 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1310 162 1319 H SPACE SUB_CHARS 1 1310 162 1319 E SPACE SUB_CHARS 1 1310 162 1319 - SPACE STRAND 3 1313 8 COLOUR_TEXT_REGION 3 1313 8 1313 51 STRAND 36 1313 41 COLOUR_TEXT_REGION 36 1313 41 1313 51 STRAND 57 1313 64 COLOUR_TEXT_REGION 57 1313 64 1313 51 STRAND 73 1313 77 COLOUR_TEXT_REGION 73 1313 77 1313 51 STRAND 113 1313 120 COLOUR_TEXT_REGION 113 1313 120 1313 51 STRAND 124 1313 124 COLOUR_TEXT_REGION 124 1313 124 1313 51 STRAND 156 1313 158 COLOUR_TEXT_REGION 156 1313 158 1313 51 HELIX 18 1313 29 COLOUR_TEXT_REGION 18 1313 29 1313 50 HELIX 46 1313 53 COLOUR_TEXT_REGION 46 1313 53 1313 50 HELIX 97 1313 107 COLOUR_TEXT_REGION 97 1313 107 1313 50 HELIX 132 1313 151 COLOUR_TEXT_REGION 132 1313 151 1313 50 STRAND 3 1318 8 COLOUR_TEXT_REGION 3 1318 8 1318 51 STRAND 37 1318 40 COLOUR_TEXT_REGION 37 1318 40 1318 51 STRAND 57 1318 64 COLOUR_TEXT_REGION 57 1318 64 1318 51 STRAND 73 1318 77 COLOUR_TEXT_REGION 73 1318 77 1318 51 STRAND 114 1318 120 COLOUR_TEXT_REGION 114 1318 120 1318 51 STRAND 156 1318 158 COLOUR_TEXT_REGION 156 1318 158 1318 51 HELIX 18 1318 28 COLOUR_TEXT_REGION 18 1318 28 1318 50 HELIX 46 1318 53 COLOUR_TEXT_REGION 46 1318 53 1318 50 HELIX 97 1318 107 COLOUR_TEXT_REGION 97 1318 107 1318 50 HELIX 132 1318 151 COLOUR_TEXT_REGION 132 1318 151 1318 50 STRAND 3 1319 8 COLOUR_TEXT_REGION 3 1319 8 1319 51 STRAND 36 1319 41 COLOUR_TEXT_REGION 36 1319 41 1319 51 STRAND 57 1319 64 COLOUR_TEXT_REGION 57 1319 64 1319 51 STRAND 72 1319 77 COLOUR_TEXT_REGION 72 1319 77 1319 51 STRAND 113 1319 121 COLOUR_TEXT_REGION 113 1319 121 1319 51 STRAND 123 1319 124 COLOUR_TEXT_REGION 123 1319 124 1319 51 STRAND 155 1319 158 COLOUR_TEXT_REGION 155 1319 158 1319 51 HELIX 18 1319 29 COLOUR_TEXT_REGION 18 1319 29 1319 50 HELIX 47 1319 52 COLOUR_TEXT_REGION 47 1319 52 1319 50 HELIX 97 1319 107 COLOUR_TEXT_REGION 97 1319 107 1319 50 HELIX 132 1319 151 COLOUR_TEXT_REGION 132 1319 151 1319 50