SILENT_MODE BLOCK_FILE jp_qEBFjDW.concise.blc MAX_NSEQ 884 MAX_INPUT_LEN 886 OUTPUT_FILE jp_qEBFjDW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 198 873 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 874 198 883 H SPACE SUB_CHARS 1 874 198 883 E SPACE SUB_CHARS 1 874 198 883 - SPACE STRAND 7 877 12 COLOUR_TEXT_REGION 7 877 12 877 51 STRAND 33 877 39 COLOUR_TEXT_REGION 33 877 39 877 51 STRAND 59 877 63 COLOUR_TEXT_REGION 59 877 63 877 51 STRAND 73 877 77 COLOUR_TEXT_REGION 73 877 77 877 51 STRAND 82 877 87 COLOUR_TEXT_REGION 82 877 87 877 51 STRAND 92 877 96 COLOUR_TEXT_REGION 92 877 96 877 51 STRAND 124 877 130 COLOUR_TEXT_REGION 124 877 130 877 51 STRAND 149 877 153 COLOUR_TEXT_REGION 149 877 153 877 51 STRAND 175 877 176 COLOUR_TEXT_REGION 175 877 176 877 51 HELIX 17 877 25 COLOUR_TEXT_REGION 17 877 25 877 50 HELIX 45 877 54 COLOUR_TEXT_REGION 45 877 54 877 50 HELIX 109 877 119 COLOUR_TEXT_REGION 109 877 119 877 50 HELIX 135 877 145 COLOUR_TEXT_REGION 135 877 145 877 50 HELIX 163 877 170 COLOUR_TEXT_REGION 163 877 170 877 50 HELIX 179 877 191 COLOUR_TEXT_REGION 179 877 191 877 50 STRAND 7 882 12 COLOUR_TEXT_REGION 7 882 12 882 51 STRAND 34 882 39 COLOUR_TEXT_REGION 34 882 39 882 51 STRAND 59 882 63 COLOUR_TEXT_REGION 59 882 63 882 51 STRAND 73 882 77 COLOUR_TEXT_REGION 73 882 77 882 51 STRAND 82 882 87 COLOUR_TEXT_REGION 82 882 87 882 51 STRAND 92 882 96 COLOUR_TEXT_REGION 92 882 96 882 51 STRAND 124 882 130 COLOUR_TEXT_REGION 124 882 130 882 51 STRAND 149 882 153 COLOUR_TEXT_REGION 149 882 153 882 51 STRAND 159 882 160 COLOUR_TEXT_REGION 159 882 160 882 51 STRAND 175 882 177 COLOUR_TEXT_REGION 175 882 177 882 51 HELIX 17 882 24 COLOUR_TEXT_REGION 17 882 24 882 50 HELIX 45 882 53 COLOUR_TEXT_REGION 45 882 53 882 50 HELIX 109 882 119 COLOUR_TEXT_REGION 109 882 119 882 50 HELIX 134 882 146 COLOUR_TEXT_REGION 134 882 146 882 50 HELIX 163 882 170 COLOUR_TEXT_REGION 163 882 170 882 50 HELIX 179 882 191 COLOUR_TEXT_REGION 179 882 191 882 50 STRAND 7 883 11 COLOUR_TEXT_REGION 7 883 11 883 51 STRAND 33 883 39 COLOUR_TEXT_REGION 33 883 39 883 51 STRAND 59 883 63 COLOUR_TEXT_REGION 59 883 63 883 51 STRAND 73 883 78 COLOUR_TEXT_REGION 73 883 78 883 51 STRAND 82 883 87 COLOUR_TEXT_REGION 82 883 87 883 51 STRAND 91 883 96 COLOUR_TEXT_REGION 91 883 96 883 51 STRAND 124 883 130 COLOUR_TEXT_REGION 124 883 130 883 51 STRAND 149 883 153 COLOUR_TEXT_REGION 149 883 153 883 51 STRAND 175 883 176 COLOUR_TEXT_REGION 175 883 176 883 51 HELIX 17 883 25 COLOUR_TEXT_REGION 17 883 25 883 50 HELIX 45 883 55 COLOUR_TEXT_REGION 45 883 55 883 50 HELIX 109 883 119 COLOUR_TEXT_REGION 109 883 119 883 50 HELIX 137 883 145 COLOUR_TEXT_REGION 137 883 145 883 50 HELIX 164 883 170 COLOUR_TEXT_REGION 164 883 170 883 50 HELIX 180 883 191 COLOUR_TEXT_REGION 180 883 191 883 50