SILENT_MODE BLOCK_FILE jp_hm6JESO.concise.blc MAX_NSEQ 687 MAX_INPUT_LEN 689 OUTPUT_FILE jp_hm6JESO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 121 676 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 677 121 686 H SPACE SUB_CHARS 1 677 121 686 E SPACE SUB_CHARS 1 677 121 686 - SPACE STRAND 115 680 118 COLOUR_TEXT_REGION 115 680 118 680 51 HELIX 3 680 31 COLOUR_TEXT_REGION 3 680 31 680 50 HELIX 41 680 49 COLOUR_TEXT_REGION 41 680 49 680 50 HELIX 61 680 70 COLOUR_TEXT_REGION 61 680 70 680 50 HELIX 74 680 82 COLOUR_TEXT_REGION 74 680 82 680 50 HELIX 86 680 86 COLOUR_TEXT_REGION 86 680 86 680 50 HELIX 93 680 102 COLOUR_TEXT_REGION 93 680 102 680 50 HELIX 111 680 114 COLOUR_TEXT_REGION 111 680 114 680 50 STRAND 116 685 118 COLOUR_TEXT_REGION 116 685 118 685 51 HELIX 3 685 30 COLOUR_TEXT_REGION 3 685 30 685 50 HELIX 41 685 49 COLOUR_TEXT_REGION 41 685 49 685 50 HELIX 61 685 71 COLOUR_TEXT_REGION 61 685 71 685 50 HELIX 74 685 82 COLOUR_TEXT_REGION 74 685 82 685 50 HELIX 92 685 102 COLOUR_TEXT_REGION 92 685 102 685 50 HELIX 111 685 115 COLOUR_TEXT_REGION 111 685 115 685 50 STRAND 114 686 117 COLOUR_TEXT_REGION 114 686 117 686 51 HELIX 3 686 31 COLOUR_TEXT_REGION 3 686 31 686 50 HELIX 42 686 48 COLOUR_TEXT_REGION 42 686 48 686 50 HELIX 61 686 69 COLOUR_TEXT_REGION 61 686 69 686 50 HELIX 76 686 81 COLOUR_TEXT_REGION 76 686 81 686 50 HELIX 83 686 88 COLOUR_TEXT_REGION 83 686 88 686 50 HELIX 96 686 102 COLOUR_TEXT_REGION 96 686 102 686 50 HELIX 113 686 113 COLOUR_TEXT_REGION 113 686 113 686 50