SILENT_MODE BLOCK_FILE jp_0AfYkDl.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_0AfYkDl.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 224 13 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 14 224 23 H SPACE SUB_CHARS 1 14 224 23 E SPACE SUB_CHARS 1 14 224 23 - SPACE STRAND 15 17 27 COLOUR_TEXT_REGION 15 17 27 17 51 STRAND 62 17 66 COLOUR_TEXT_REGION 62 17 66 17 51 STRAND 70 17 74 COLOUR_TEXT_REGION 70 17 74 17 51 STRAND 84 17 88 COLOUR_TEXT_REGION 84 17 88 17 51 STRAND 93 17 100 COLOUR_TEXT_REGION 93 17 100 17 51 STRAND 125 17 135 COLOUR_TEXT_REGION 125 17 135 17 51 STRAND 174 17 181 COLOUR_TEXT_REGION 174 17 181 17 51 STRAND 194 17 199 COLOUR_TEXT_REGION 194 17 199 17 51 STRAND 214 17 214 COLOUR_TEXT_REGION 214 17 214 17 51 HELIX 37 17 46 COLOUR_TEXT_REGION 37 17 46 17 50 HELIX 114 17 122 COLOUR_TEXT_REGION 114 17 122 17 50 HELIX 167 17 173 COLOUR_TEXT_REGION 167 17 173 17 50 HELIX 182 17 184 COLOUR_TEXT_REGION 182 17 184 17 50 STRAND 16 22 27 COLOUR_TEXT_REGION 16 22 27 22 51 STRAND 62 22 66 COLOUR_TEXT_REGION 62 22 66 22 51 STRAND 70 22 74 COLOUR_TEXT_REGION 70 22 74 22 51 STRAND 84 22 88 COLOUR_TEXT_REGION 84 22 88 22 51 STRAND 93 22 100 COLOUR_TEXT_REGION 93 22 100 22 51 STRAND 126 22 135 COLOUR_TEXT_REGION 126 22 135 22 51 STRAND 173 22 181 COLOUR_TEXT_REGION 173 22 181 22 51 STRAND 195 22 199 COLOUR_TEXT_REGION 195 22 199 22 51 STRAND 206 22 206 COLOUR_TEXT_REGION 206 22 206 22 51 STRAND 213 22 215 COLOUR_TEXT_REGION 213 22 215 22 51 HELIX 37 22 46 COLOUR_TEXT_REGION 37 22 46 22 50 HELIX 114 22 122 COLOUR_TEXT_REGION 114 22 122 22 50 HELIX 125 22 125 COLOUR_TEXT_REGION 125 22 125 22 50 HELIX 167 22 170 COLOUR_TEXT_REGION 167 22 170 22 50 HELIX 184 22 184 COLOUR_TEXT_REGION 184 22 184 22 50 STRAND 14 23 28 COLOUR_TEXT_REGION 14 23 28 23 51 STRAND 42 23 46 COLOUR_TEXT_REGION 42 23 46 23 51 STRAND 62 23 66 COLOUR_TEXT_REGION 62 23 66 23 51 STRAND 71 23 74 COLOUR_TEXT_REGION 71 23 74 23 51 STRAND 84 23 88 COLOUR_TEXT_REGION 84 23 88 23 51 STRAND 93 23 100 COLOUR_TEXT_REGION 93 23 100 23 51 STRAND 124 23 136 COLOUR_TEXT_REGION 124 23 136 23 51 STRAND 175 23 180 COLOUR_TEXT_REGION 175 23 180 23 51 STRAND 193 23 199 COLOUR_TEXT_REGION 193 23 199 23 51 STRAND 220 23 222 COLOUR_TEXT_REGION 220 23 222 23 51 HELIX 114 23 119 COLOUR_TEXT_REGION 114 23 119 23 50 HELIX 122 23 123 COLOUR_TEXT_REGION 122 23 123 23 50 HELIX 166 23 172 COLOUR_TEXT_REGION 166 23 172 23 50 HELIX 174 23 174 COLOUR_TEXT_REGION 174 23 174 23 50 HELIX 181 23 184 COLOUR_TEXT_REGION 181 23 184 23 50