SILENT_MODE BLOCK_FILE jp_IuXYRBD.concise.blc MAX_NSEQ 978 MAX_INPUT_LEN 980 OUTPUT_FILE jp_IuXYRBD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 448 967 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 968 448 977 H SPACE SUB_CHARS 1 968 448 977 E SPACE SUB_CHARS 1 968 448 977 - SPACE STRAND 18 971 23 COLOUR_TEXT_REGION 18 971 23 971 51 STRAND 30 971 34 COLOUR_TEXT_REGION 30 971 34 971 51 STRAND 40 971 44 COLOUR_TEXT_REGION 40 971 44 971 51 STRAND 49 971 54 COLOUR_TEXT_REGION 49 971 54 971 51 STRAND 60 971 63 COLOUR_TEXT_REGION 60 971 63 971 51 STRAND 68 971 71 COLOUR_TEXT_REGION 68 971 71 971 51 STRAND 80 971 84 COLOUR_TEXT_REGION 80 971 84 971 51 STRAND 93 971 99 COLOUR_TEXT_REGION 93 971 99 971 51 STRAND 111 971 118 COLOUR_TEXT_REGION 111 971 118 971 51 STRAND 130 971 133 COLOUR_TEXT_REGION 130 971 133 971 51 STRAND 146 971 149 COLOUR_TEXT_REGION 146 971 149 971 51 STRAND 155 971 159 COLOUR_TEXT_REGION 155 971 159 971 51 STRAND 196 971 200 COLOUR_TEXT_REGION 196 971 200 971 51 STRAND 219 971 223 COLOUR_TEXT_REGION 219 971 223 971 51 STRAND 229 971 233 COLOUR_TEXT_REGION 229 971 233 971 51 STRAND 239 971 243 COLOUR_TEXT_REGION 239 971 243 971 51 STRAND 250 971 256 COLOUR_TEXT_REGION 250 971 256 971 51 STRAND 265 971 267 COLOUR_TEXT_REGION 265 971 267 971 51 STRAND 325 971 325 COLOUR_TEXT_REGION 325 971 325 971 51 STRAND 369 971 372 COLOUR_TEXT_REGION 369 971 372 971 51 STRAND 378 971 384 COLOUR_TEXT_REGION 378 971 384 971 51 STRAND 390 971 397 COLOUR_TEXT_REGION 390 971 397 971 51 STRAND 405 971 410 COLOUR_TEXT_REGION 405 971 410 971 51 STRAND 416 971 421 COLOUR_TEXT_REGION 416 971 421 971 51 STRAND 427 971 429 COLOUR_TEXT_REGION 427 971 429 971 51 STRAND 434 971 438 COLOUR_TEXT_REGION 434 971 438 971 51 STRAND 443 971 447 COLOUR_TEXT_REGION 443 971 447 971 51 STRAND 18 976 23 COLOUR_TEXT_REGION 18 976 23 976 51 STRAND 30 976 34 COLOUR_TEXT_REGION 30 976 34 976 51 STRAND 40 976 44 COLOUR_TEXT_REGION 40 976 44 976 51 STRAND 49 976 54 COLOUR_TEXT_REGION 49 976 54 976 51 STRAND 60 976 63 COLOUR_TEXT_REGION 60 976 63 976 51 STRAND 69 976 71 COLOUR_TEXT_REGION 69 976 71 976 51 STRAND 80 976 84 COLOUR_TEXT_REGION 80 976 84 976 51 STRAND 93 976 99 COLOUR_TEXT_REGION 93 976 99 976 51 STRAND 111 976 117 COLOUR_TEXT_REGION 111 976 117 976 51 STRAND 130 976 133 COLOUR_TEXT_REGION 130 976 133 976 51 STRAND 146 976 149 COLOUR_TEXT_REGION 146 976 149 976 51 STRAND 155 976 159 COLOUR_TEXT_REGION 155 976 159 976 51 STRAND 196 976 200 COLOUR_TEXT_REGION 196 976 200 976 51 STRAND 219 976 223 COLOUR_TEXT_REGION 219 976 223 976 51 STRAND 229 976 233 COLOUR_TEXT_REGION 229 976 233 976 51 STRAND 239 976 243 COLOUR_TEXT_REGION 239 976 243 976 51 STRAND 250 976 256 COLOUR_TEXT_REGION 250 976 256 976 51 STRAND 264 976 267 COLOUR_TEXT_REGION 264 976 267 976 51 STRAND 324 976 326 COLOUR_TEXT_REGION 324 976 326 976 51 STRAND 341 976 342 COLOUR_TEXT_REGION 341 976 342 976 51 STRAND 369 976 372 COLOUR_TEXT_REGION 369 976 372 976 51 STRAND 378 976 384 COLOUR_TEXT_REGION 378 976 384 976 51 STRAND 390 976 396 COLOUR_TEXT_REGION 390 976 396 976 51 STRAND 405 976 410 COLOUR_TEXT_REGION 405 976 410 976 51 STRAND 416 976 421 COLOUR_TEXT_REGION 416 976 421 976 51 STRAND 427 976 429 COLOUR_TEXT_REGION 427 976 429 976 51 STRAND 434 976 438 COLOUR_TEXT_REGION 434 976 438 976 51 STRAND 443 976 447 COLOUR_TEXT_REGION 443 976 447 976 51 STRAND 18 977 23 COLOUR_TEXT_REGION 18 977 23 977 51 STRAND 30 977 34 COLOUR_TEXT_REGION 30 977 34 977 51 STRAND 40 977 45 COLOUR_TEXT_REGION 40 977 45 977 51 STRAND 49 977 53 COLOUR_TEXT_REGION 49 977 53 977 51 STRAND 60 977 63 COLOUR_TEXT_REGION 60 977 63 977 51 STRAND 68 977 71 COLOUR_TEXT_REGION 68 977 71 977 51 STRAND 79 977 85 COLOUR_TEXT_REGION 79 977 85 977 51 STRAND 93 977 99 COLOUR_TEXT_REGION 93 977 99 977 51 STRAND 111 977 118 COLOUR_TEXT_REGION 111 977 118 977 51 STRAND 130 977 134 COLOUR_TEXT_REGION 130 977 134 977 51 STRAND 146 977 149 COLOUR_TEXT_REGION 146 977 149 977 51 STRAND 155 977 159 COLOUR_TEXT_REGION 155 977 159 977 51 STRAND 197 977 200 COLOUR_TEXT_REGION 197 977 200 977 51 STRAND 219 977 222 COLOUR_TEXT_REGION 219 977 222 977 51 STRAND 229 977 233 COLOUR_TEXT_REGION 229 977 233 977 51 STRAND 238 977 243 COLOUR_TEXT_REGION 238 977 243 977 51 STRAND 251 977 257 COLOUR_TEXT_REGION 251 977 257 977 51 STRAND 315 977 316 COLOUR_TEXT_REGION 315 977 316 977 51 STRAND 369 977 372 COLOUR_TEXT_REGION 369 977 372 977 51 STRAND 378 977 384 COLOUR_TEXT_REGION 378 977 384 977 51 STRAND 390 977 392 COLOUR_TEXT_REGION 390 977 392 977 51 STRAND 395 977 397 COLOUR_TEXT_REGION 395 977 397 977 51 STRAND 405 977 410 COLOUR_TEXT_REGION 405 977 410 977 51 STRAND 416 977 421 COLOUR_TEXT_REGION 416 977 421 977 51 STRAND 427 977 429 COLOUR_TEXT_REGION 427 977 429 977 51 STRAND 434 977 438 COLOUR_TEXT_REGION 434 977 438 977 51 STRAND 443 977 447 COLOUR_TEXT_REGION 443 977 447 977 51