SILENT_MODE
BLOCK_FILE jp_P2EOKj0.concise.blc
MAX_NSEQ 671
MAX_INPUT_LEN 673
OUTPUT_FILE jp_P2EOKj0.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 92 660   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 661 92 670 H SPACE
SUB_CHARS 1 661 92 670 E SPACE
SUB_CHARS 1 661 92 670 - SPACE
HELIX 3 664 17
COLOUR_TEXT_REGION 3 664 17 664 50
HELIX 25 664 31
COLOUR_TEXT_REGION 25 664 31 664 50
HELIX 37 664 45
COLOUR_TEXT_REGION 37 664 45 664 50
HELIX 50 664 61
COLOUR_TEXT_REGION 50 664 61 664 50
HELIX 67 664 77
COLOUR_TEXT_REGION 67 664 77 664 50
HELIX 81 664 88
COLOUR_TEXT_REGION 81 664 88 664 50
HELIX 3 669 17
COLOUR_TEXT_REGION 3 669 17 669 50
HELIX 25 669 31
COLOUR_TEXT_REGION 25 669 31 669 50
HELIX 37 669 44
COLOUR_TEXT_REGION 37 669 44 669 50
HELIX 50 669 61
COLOUR_TEXT_REGION 50 669 61 669 50
HELIX 67 669 77
COLOUR_TEXT_REGION 67 669 77 669 50
HELIX 81 669 87
COLOUR_TEXT_REGION 81 669 87 669 50
HELIX 3 670 18
COLOUR_TEXT_REGION 3 670 18 670 50
HELIX 24 670 31
COLOUR_TEXT_REGION 24 670 31 670 50
HELIX 37 670 45
COLOUR_TEXT_REGION 37 670 45 670 50
HELIX 49 670 61
COLOUR_TEXT_REGION 49 670 61 670 50
HELIX 66 670 77
COLOUR_TEXT_REGION 66 670 77 670 50
HELIX 81 670 88
COLOUR_TEXT_REGION 81 670 88 670 50