SILENT_MODE BLOCK_FILE jp_xRZSPF0.concise.blc MAX_NSEQ 571 MAX_INPUT_LEN 573 OUTPUT_FILE jp_xRZSPF0.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 289 560 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 561 289 570 H SPACE SUB_CHARS 1 561 289 570 E SPACE SUB_CHARS 1 561 289 570 - SPACE STRAND 25 564 31 COLOUR_TEXT_REGION 25 564 31 564 51 STRAND 68 564 70 COLOUR_TEXT_REGION 68 564 70 564 51 STRAND 75 564 78 COLOUR_TEXT_REGION 75 564 78 564 51 STRAND 81 564 85 COLOUR_TEXT_REGION 81 564 85 564 51 STRAND 93 564 95 COLOUR_TEXT_REGION 93 564 95 564 51 STRAND 104 564 105 COLOUR_TEXT_REGION 104 564 105 564 51 STRAND 113 564 115 COLOUR_TEXT_REGION 113 564 115 564 51 STRAND 121 564 126 COLOUR_TEXT_REGION 121 564 126 564 51 STRAND 146 564 149 COLOUR_TEXT_REGION 146 564 149 564 51 STRAND 172 564 177 COLOUR_TEXT_REGION 172 564 177 564 51 STRAND 201 564 205 COLOUR_TEXT_REGION 201 564 205 564 51 STRAND 259 564 260 COLOUR_TEXT_REGION 259 564 260 564 51 HELIX 2 564 20 COLOUR_TEXT_REGION 2 564 20 564 50 HELIX 46 564 59 COLOUR_TEXT_REGION 46 564 59 564 50 HELIX 128 564 136 COLOUR_TEXT_REGION 128 564 136 564 50 HELIX 156 564 167 COLOUR_TEXT_REGION 156 564 167 564 50 HELIX 182 564 193 COLOUR_TEXT_REGION 182 564 193 564 50 HELIX 211 564 212 COLOUR_TEXT_REGION 211 564 212 564 50 HELIX 223 564 233 COLOUR_TEXT_REGION 223 564 233 564 50 HELIX 242 564 255 COLOUR_TEXT_REGION 242 564 255 564 50 HELIX 261 564 265 COLOUR_TEXT_REGION 261 564 265 564 50 HELIX 272 564 283 COLOUR_TEXT_REGION 272 564 283 564 50 STRAND 24 569 31 COLOUR_TEXT_REGION 24 569 31 569 51 STRAND 68 569 70 COLOUR_TEXT_REGION 68 569 70 569 51 STRAND 75 569 78 COLOUR_TEXT_REGION 75 569 78 569 51 STRAND 81 569 85 COLOUR_TEXT_REGION 81 569 85 569 51 STRAND 92 569 94 COLOUR_TEXT_REGION 92 569 94 569 51 STRAND 103 569 105 COLOUR_TEXT_REGION 103 569 105 569 51 STRAND 113 569 114 COLOUR_TEXT_REGION 113 569 114 569 51 STRAND 121 569 126 COLOUR_TEXT_REGION 121 569 126 569 51 STRAND 146 569 149 COLOUR_TEXT_REGION 146 569 149 569 51 STRAND 173 569 177 COLOUR_TEXT_REGION 173 569 177 569 51 STRAND 201 569 204 COLOUR_TEXT_REGION 201 569 204 569 51 STRAND 259 569 259 COLOUR_TEXT_REGION 259 569 259 569 51 HELIX 2 569 20 COLOUR_TEXT_REGION 2 569 20 569 50 HELIX 46 569 59 COLOUR_TEXT_REGION 46 569 59 569 50 HELIX 128 569 136 COLOUR_TEXT_REGION 128 569 136 569 50 HELIX 156 569 166 COLOUR_TEXT_REGION 156 569 166 569 50 HELIX 182 569 193 COLOUR_TEXT_REGION 182 569 193 569 50 HELIX 210 569 211 COLOUR_TEXT_REGION 210 569 211 569 50 HELIX 223 569 234 COLOUR_TEXT_REGION 223 569 234 569 50 HELIX 243 569 255 COLOUR_TEXT_REGION 243 569 255 569 50 HELIX 261 569 265 COLOUR_TEXT_REGION 261 569 265 569 50 HELIX 272 569 283 COLOUR_TEXT_REGION 272 569 283 569 50 STRAND 69 570 70 COLOUR_TEXT_REGION 69 570 70 570 51 STRAND 75 570 79 COLOUR_TEXT_REGION 75 570 79 570 51 STRAND 81 570 85 COLOUR_TEXT_REGION 81 570 85 570 51 STRAND 94 570 95 COLOUR_TEXT_REGION 94 570 95 570 51 STRAND 113 570 115 COLOUR_TEXT_REGION 113 570 115 570 51 STRAND 121 570 125 COLOUR_TEXT_REGION 121 570 125 570 51 STRAND 145 570 149 COLOUR_TEXT_REGION 145 570 149 570 51 STRAND 172 570 177 COLOUR_TEXT_REGION 172 570 177 570 51 STRAND 201 570 205 COLOUR_TEXT_REGION 201 570 205 570 51 STRAND 260 570 260 COLOUR_TEXT_REGION 260 570 260 570 51 HELIX 2 570 20 COLOUR_TEXT_REGION 2 570 20 570 50 HELIX 27 570 32 COLOUR_TEXT_REGION 27 570 32 570 50 HELIX 45 570 60 COLOUR_TEXT_REGION 45 570 60 570 50 HELIX 128 570 136 COLOUR_TEXT_REGION 128 570 136 570 50 HELIX 156 570 167 COLOUR_TEXT_REGION 156 570 167 570 50 HELIX 183 570 193 COLOUR_TEXT_REGION 183 570 193 570 50 HELIX 211 570 213 COLOUR_TEXT_REGION 211 570 213 570 50 HELIX 223 570 233 COLOUR_TEXT_REGION 223 570 233 570 50 HELIX 241 570 255 COLOUR_TEXT_REGION 241 570 255 570 50 HELIX 258 570 259 COLOUR_TEXT_REGION 258 570 259 570 50 HELIX 261 570 265 COLOUR_TEXT_REGION 261 570 265 570 50 HELIX 272 570 282 COLOUR_TEXT_REGION 272 570 282 570 50