SILENT_MODE BLOCK_FILE jp_vzH3CUI.concise.blc MAX_NSEQ 833 MAX_INPUT_LEN 835 OUTPUT_FILE jp_vzH3CUI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 310 822 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 823 310 832 H SPACE SUB_CHARS 1 823 310 832 E SPACE SUB_CHARS 1 823 310 832 - SPACE STRAND 46 826 46 COLOUR_TEXT_REGION 46 826 46 826 51 STRAND 80 826 82 COLOUR_TEXT_REGION 80 826 82 826 51 STRAND 87 826 92 COLOUR_TEXT_REGION 87 826 92 826 51 STRAND 98 826 105 COLOUR_TEXT_REGION 98 826 105 826 51 STRAND 144 826 147 COLOUR_TEXT_REGION 144 826 147 826 51 STRAND 163 826 166 COLOUR_TEXT_REGION 163 826 166 826 51 STRAND 186 826 190 COLOUR_TEXT_REGION 186 826 190 826 51 STRAND 217 826 221 COLOUR_TEXT_REGION 217 826 221 826 51 HELIX 0 826 17 COLOUR_TEXT_REGION 0 826 17 826 50 HELIX 23 826 31 COLOUR_TEXT_REGION 23 826 31 826 50 HELIX 36 826 41 COLOUR_TEXT_REGION 36 826 41 826 50 HELIX 52 826 59 COLOUR_TEXT_REGION 52 826 59 826 50 HELIX 65 826 71 COLOUR_TEXT_REGION 65 826 71 826 50 HELIX 132 826 138 COLOUR_TEXT_REGION 132 826 138 826 50 HELIX 151 826 158 COLOUR_TEXT_REGION 151 826 158 826 50 HELIX 172 826 181 COLOUR_TEXT_REGION 172 826 181 826 50 HELIX 194 826 212 COLOUR_TEXT_REGION 194 826 212 826 50 HELIX 229 826 234 COLOUR_TEXT_REGION 229 826 234 826 50 HELIX 237 826 245 COLOUR_TEXT_REGION 237 826 245 826 50 HELIX 250 826 260 COLOUR_TEXT_REGION 250 826 260 826 50 HELIX 267 826 283 COLOUR_TEXT_REGION 267 826 283 826 50 HELIX 287 826 300 COLOUR_TEXT_REGION 287 826 300 826 50 HELIX 305 826 308 COLOUR_TEXT_REGION 305 826 308 826 50 STRAND 79 831 82 COLOUR_TEXT_REGION 79 831 82 831 51 STRAND 87 831 92 COLOUR_TEXT_REGION 87 831 92 831 51 STRAND 98 831 105 COLOUR_TEXT_REGION 98 831 105 831 51 STRAND 128 831 129 COLOUR_TEXT_REGION 128 831 129 831 51 STRAND 144 831 148 COLOUR_TEXT_REGION 144 831 148 831 51 STRAND 164 831 167 COLOUR_TEXT_REGION 164 831 167 831 51 STRAND 186 831 190 COLOUR_TEXT_REGION 186 831 190 831 51 STRAND 216 831 221 COLOUR_TEXT_REGION 216 831 221 831 51 HELIX 0 831 17 COLOUR_TEXT_REGION 0 831 17 831 50 HELIX 23 831 31 COLOUR_TEXT_REGION 23 831 31 831 50 HELIX 36 831 42 COLOUR_TEXT_REGION 36 831 42 831 50 HELIX 52 831 59 COLOUR_TEXT_REGION 52 831 59 831 50 HELIX 65 831 71 COLOUR_TEXT_REGION 65 831 71 831 50 HELIX 132 831 139 COLOUR_TEXT_REGION 132 831 139 831 50 HELIX 150 831 158 COLOUR_TEXT_REGION 150 831 158 831 50 HELIX 172 831 181 COLOUR_TEXT_REGION 172 831 181 831 50 HELIX 194 831 212 COLOUR_TEXT_REGION 194 831 212 831 50 HELIX 228 831 234 COLOUR_TEXT_REGION 228 831 234 831 50 HELIX 237 831 245 COLOUR_TEXT_REGION 237 831 245 831 50 HELIX 250 831 260 COLOUR_TEXT_REGION 250 831 260 831 50 HELIX 267 831 283 COLOUR_TEXT_REGION 267 831 283 831 50 HELIX 287 831 300 COLOUR_TEXT_REGION 287 831 300 831 50 HELIX 305 831 308 COLOUR_TEXT_REGION 305 831 308 831 50 STRAND 44 832 47 COLOUR_TEXT_REGION 44 832 47 832 51 STRAND 86 832 92 COLOUR_TEXT_REGION 86 832 92 832 51 STRAND 98 832 105 COLOUR_TEXT_REGION 98 832 105 832 51 STRAND 143 832 147 COLOUR_TEXT_REGION 143 832 147 832 51 STRAND 163 832 166 COLOUR_TEXT_REGION 163 832 166 832 51 STRAND 186 832 190 COLOUR_TEXT_REGION 186 832 190 832 51 STRAND 217 832 221 COLOUR_TEXT_REGION 217 832 221 832 51 HELIX 0 832 17 COLOUR_TEXT_REGION 0 832 17 832 50 HELIX 23 832 31 COLOUR_TEXT_REGION 23 832 31 832 50 HELIX 36 832 41 COLOUR_TEXT_REGION 36 832 41 832 50 HELIX 53 832 58 COLOUR_TEXT_REGION 53 832 58 832 50 HELIX 65 832 71 COLOUR_TEXT_REGION 65 832 71 832 50 HELIX 132 832 137 COLOUR_TEXT_REGION 132 832 137 832 50 HELIX 153 832 158 COLOUR_TEXT_REGION 153 832 158 832 50 HELIX 172 832 181 COLOUR_TEXT_REGION 172 832 181 832 50 HELIX 196 832 212 COLOUR_TEXT_REGION 196 832 212 832 50 HELIX 231 832 233 COLOUR_TEXT_REGION 231 832 233 832 50 HELIX 237 832 246 COLOUR_TEXT_REGION 237 832 246 832 50 HELIX 250 832 260 COLOUR_TEXT_REGION 250 832 260 832 50 HELIX 267 832 283 COLOUR_TEXT_REGION 267 832 283 832 50 HELIX 287 832 300 COLOUR_TEXT_REGION 287 832 300 832 50 HELIX 305 832 308 COLOUR_TEXT_REGION 305 832 308 832 50