QUERY : NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK : QUERY
UniRef90_E3G1K5 : HQKPVNNWTCEDFLALDSSFQPTAVGFAEALNNKDKPEDAVMDVKGIETVTPAIVQACTENKKASFKSKVESEWEKFKK : UniRef90_E3G1K5
UniRef90_E5YM76 : NKKPVKSWTCEDFLALDESFKPTAIGFAEALNKKDKPEDAVLDVDGTEKVIPLVIEACKQNPKESFAQKVKSEWKK--- : UniRef90_E5YM76
UniRef90_S6I052 : TKQPVAQWTCADFLAVDESFQPTAVGLGEAINKKGKVEDAVLDVDGIAKITPLVVTACKETPKDSFVSKLKSEWDKVKK : UniRef90_S6I052
UniRef90_F9UB85 : SKKPDSKMTCEEFLGLDESFQPEAVSWAVAYNAAGEPEAEAVDVEGIETVVPFVVEECKKAPKETFWQKAKAEMKKLE- : UniRef90_F9UB85
UniRef90_G0GV70 : HKKPVNSWTCEDFLAVNEDFQPTAVGVAEALNSKDKPEDAVLNVSGIEKVTPTIVQACQKDKKMSFKDKVRAEWDNLKK : UniRef90_G0GV70
UniRef90_UPI00046FAA58 : --KPVPLWLCSDYLAVDESYQPTVLGFAEALNRSGKPEAEVLDVDGIAKVKPELLQYCKENPKIALRDALVQSWGKIKK : UniRef90_UPI00046FAA58
UniRef90_UPI000370E357 : -KKPAKDWTCADFLAIDDEFKPKAVYWAAAYSKRGKEEGDMLDIEGTEKVTPMIITACANAPKESFWAKFKDEWHKMGR : UniRef90_UPI000370E357
UniRef90_UPI0002DD5208 : TKKPVSQWTCEDFLSVDESFRPTAVGVGEAVNKSGKVEDAVLDVDGVAKITPLVVTACEKDKSTGFVQKLKDEWSKVKK : UniRef90_UPI0002DD5208
UniRef90_C1D607 : -KKPVSQWTCEEFLTLDDQFKPNAVYFSEGLNKKHQPVDAVMDETGALKVTPMVVTECQKDRKASFWSKLKTTWQHIEQ : UniRef90_C1D607
UniRef90_R7TE06 : --KPITEWTCADYLDLQENYQPYAIGWATAYSKSGKPEDTAFDVQGIETIKPTLLEYCNRNLQASFWDKVKAEFKK--- : UniRef90_R7TE06
UniRef90_R9VP95 : -GKPVNSWTCEDFLALKASFQPTAIGIAEALNNKDKPEEAVVDVQGIETVTPAVIEACKQDKQATFKSKVEGEWDKLKK : UniRef90_R9VP95
UniRef90_J7QPM2 : TKKPTSKWTCEDFLAVDDQFQPKVIYWSSAQSKKGKPLATDVDIEGTEKVIPIIIDDCKKAPQESFWSKLKDAWKKVE- : UniRef90_J7QPM2
UniRef90_E6QRD0 : THQP-AKMTCEEFTALDETAQPKVVYWAEGFNHKGKPKDAVIDIDSTDKLVPVLITECKKTPKASFWQKVKSHF----- : UniRef90_E6QRD0
UniRef90_Q2YK18 : -KKKVSELTCEDFNGLEESFKPTVVGWVVGFNKKGKEEDAVIDVDGIETVTPAIIEACKQEPKASFWKKAEAELKKV-- : UniRef90_Q2YK18
UniRef90_I0DVV8 : DTKPVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVEDSTLNISGIETATPLIVDACKKAPKESFIQKVEEYLKK--- : UniRef90_I0DVV8
UniRef90_UPI00036E814D : SGKMLDKVTCEKFNGLDETFKPKVIAWAAGYRQGQKKPDAVIDIDGIEKVTPFVAEECRKAPSALLWSKIDGEMKKI-- : UniRef90_UPI00036E814D
UniRef90_R8AP95 : --KPIAEWTCAEFLAVDESFRPSAVYFAEGFNQKDKPEGAMIDIAGVEKAIPFLIEDCSKNPQEKLLKQAEK------- : UniRef90_R8AP95
UniRef90_W1A9B5 : TQKPVSQWTCDDFLSIDESFYPTAVGIAGIITGKNKVEDSTIDVQGIMTATPTIIESCKKDPKSSFLQRVE-EFGK--- : UniRef90_W1A9B5
UniRef90_Q2KWS9 : TKKPVQLWLCSDYLEVNETYRPTALGFAEAVNKKGKVEDAVVDLEGIEKIKPSLLTYCKENPKIALRDALDNVRK---- : UniRef90_Q2KWS9
UniRef90_K8W5Z6 : DHKPLAKWTCEEFLAIDDSFYPTAVGFGELLTKKDKVEDTVLDVDGIQTLTPLVLEACKKDAKANFVEQVKKA------ : UniRef90_K8W5Z6
UniRef90_G6F1S9 : -QKPINQWTCQDFLMLDENFQPTAVGFAEGITKKDKVVDPTLDVQGIAQVVPVLVQECKKSPKDNFVNKVKTNLTDKK- : UniRef90_G6F1S9
UniRef90_A0A052I713 : -KKALPLWLCSDYVGLDESYRPIALGFAEALGRGGKPESEVLDVEGIAKLTPTLLTYCQENPKVALRDAL--------- : UniRef90_A0A052I713
UniRef90_UPI0003478E7D : --KPLDKVTCEEFNGFEDTFKPKVIAWAAGYKQQKKPDVVAIDIAGVEKVTPLIAEECRKAPAASLWSKMDGELKKV-- : UniRef90_UPI0003478E7D
UniRef90_Q2KVV4 : -KKPMPLWQCSDYLQLNESYRPVALGFAEAVNRKGKPEDDVVDIEGIAQITPTLVTYCQENPKVALTDALAQ------- : UniRef90_Q2KVV4
UniRef90_C1D4E4 : --KGYYKWTCQDFLDLDESFKPKVVYWAEGFNNKGKPDAAMVDVQGVEKIIPVVVDQCKLKPTEKLMKIMKSA------ : UniRef90_C1D4E4
UniRef90_UPI000381EB08 : -GKHLETVTCGDFGLLDESFRPQAVVYAANYGPKGKAH-PTVTLDGVENVVPIVVQQCKAQPGNHFLTAVRNAMK---- : UniRef90_UPI000381EB08
UniRef90_R4WT62 : ------KMTCSDYAAVDEAYRPALVYWVAGVDKLGVKETDTFTVDTAQPVGAAVLEECKSDPKASFVSKVRS-MIKAKK : UniRef90_R4WT62
UniRef90_U2NSG4 : -------------MSLDESYQPTAIGFAEALNKKGKVEDSVLDIDGIEKVTPKLIEVCKKDPQSKFLTELEAAWKDIKK : UniRef90_U2NSG4
UniRef90_S1IL49 : ---------------MDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK : UniRef90_S1IL49
UniRef90_UPI00026CCF13 : TRKGGQEISCEDFLDIENKYKPQAISYIIGYNKARNPSVKAIDISAVDTLTPVIVSTCKSHPKGSLHDTVST------- : UniRef90_UPI00026CCF13
UniRef90_W6WXV3 : ----PAKMTCADYVSVDEVYRPALVYWVAGVDKLGIKETDTMVVDTAHPIAETVAEACTKDPQTPFVSKVRS-MIKAKK : UniRef90_W6WXV3
UniRef90_G8MGV0 : -KITPAKMTCADFVQVDDAYKPALVYWVAGVDKLGVTGTETTVVDTMQPVAATVAQECQKDPQTKFMSKVRS-MIKSKQ : UniRef90_G8MGV0
UniRef90_C9U0Z6 : -KKKVSELTCEDFNGLEESFKPTVVGWVVGFNKKGKEEDAVIDVDGIETVTP--------------------------- : UniRef90_C9U0Z6
UniRef90_UPI000306259D : ----PAKMTCAEFVALEDVYKPAVIYWATGVDKLGVRETDQLTIDTAHPVAMEVTEECKKTPNTKVAEKIKS------- : UniRef90_UPI000306259D
UniRef90_G9YCD3 : -------MSCEDFLALDTQAQTPVVFWVSNLDPNDQGNDDVDERQIDEFVTPMVIEECHKTPALKLVD----------- : UniRef90_G9YCD3
UniRef90_A0A038GMU8 : ----PAKMTCADFVQVDEAYQPALVYWVAGVDKLGVKETETTVIDTAQPVGTTVAEACKLDPKTKFVSKVRSMIK---- : UniRef90_A0A038GMU8
UniRef90_UPI000471CFF3 : -------MSCEDFLALDTQAQTPVVFWVSNLDTHYKGGDYVDEQQVDEFVTPMVIEECNKAPATKLIDKMEQYVKK--- : UniRef90_UPI000471CFF3
UniRef90_UPI00040E7A53 : --KTPQDWTCSDFLKVPANSKANVVYWLDGFNRSAKSNTADVTAESFKHPIGKLVVECRKNQTQNLWDAIVKHF----- : UniRef90_UPI00040E7A53
UniRef90_A6CY27 : -----STMTCSEFLELDYDLMPVTLGYLVAWNHKSNSEVQVFDITQLDAIIDEIVDQCHKAPAARVHKVVAKQLADAK- : UniRef90_A6CY27
UniRef90_W6WWY9 : ----PAKMKCEDFVAVAAEYQPSLVYWAAGVDKLGVKETDTMVVDTAQPIA-VIVGECKKTPKASFKTKV--------- : UniRef90_W6WWY9
UniRef90_L8Y173 : --KPLFEWTCADFLEVKTDYRPVAVAVVDMLNKQGKIEDAILDLEGVENISSQVRTVCESDPDVPFALTLK-------- : UniRef90_L8Y173
UniRef90_X0S140 : --KNPATYTCADLLEVDVDYVPQVVYWLDGYTWAGDPVYDE-DVEWVPVETDTIITECKKNPSQKAAAVVKKHRKSKK- : UniRef90_X0S140
UniRef90_C5AMD7 : ----PAKMVCADFETLDDAYKPAVIYWATGVDKLGVRETDQITIDTAHPVAEQVTEECKATPKVKIVDKIR-MMAKAGK : UniRef90_C5AMD7
UniRef90_F0Q134 : ------KTTCSDYVGMDETIKPKFIYYAVGHTQGGKKE-AVFEEDAIEKIKPELDQYCSVHLTKSAYAKVMAS------ : UniRef90_F0Q134
UniRef90_F3WXU9 : ------TVACRDTADVLATFRPEVVAFAPAHTKKGKPVTDE-EVAGVETFTPVAFQNCTVAAGNHFQQDV--------- : UniRef90_F3WXU9
UniRef90_A1JKE6 : ----PSDMTCKEFLDLNPKSFTPVVYWVLNDDTQYKKGDYVDLHETDTIVTPKVVEVCKKAPESKL------------- : UniRef90_A1JKE6
UniRef90_R8AUW9 : -----QDMTCKDFLLLNPKAQTPMAFWVANYDTDYKHGDYV-NAQVVGSITPMIIQECQKHPEKSMKEKISAAQAKVKQ : UniRef90_R8AUW9
UniRef90_U0G4A0 : ----VDKMTCEQFNELELQTQPVVMEYLLSWNYNADEVAVIIESNGIEAYIDELAQQCRDTPDIMLHDIVVDE------ : UniRef90_U0G4A0
UniRef90_W1EK41 : ---TPQNMTCQEFMDMNPKSMTPVAFWVVNRNTDFSGGDYV-DWHEVETVVPKMLQECHKNPAAKLWRSQRGHQK---- : UniRef90_W1EK41
UniRef90_W8UFQ0 : ---TPAEMTCKEFLDLNPKSMTPVAFWILNQDTQYKKGDNVDFQEVDTIYTPKIIDICKKSPEKKVSDVKKD------- : UniRef90_W8UFQ0
UniRef90_D4F1H5 : TDTTPQQMTCKEFINLNPKAMTPVAFWLLNKDTDYRGGDYVDWSEVETFSVPKVLESCKQHPQQKLRD-LKDAMKSAVK : UniRef90_D4F1H5
UniRef90_M3D105 : ----PDKMTCQEFINLNPKAMLPVAWWMLNEETVYKGGDSVSLNETDLTSIPQVIEYCKRNPQSKLYS----------- : UniRef90_M3D105
UniRef90_UPI0002F54903 : -----STITCADFLELDQEIIPVSVNYLMGWDSETQSIDTVEDFDTID--ITQIVEVCEQHPTALAVEVIEQQTAKA-- : UniRef90_UPI0002F54903
UniRef90_C4UQA5 : ---MPSDMTCKEFLDLNPKSMTPVAFWIINKDTQFKKGDTIAFQEVDTVYTPKIIDICKKSPDQKVTD-IKKTW----- : UniRef90_C4UQA5
UniRef90_UPI0004695181 : ---TPENMTCQEFVDLNPKSYTPVAFWVINDSTQYKHGDTVDFNEVAVAVTPKLIEACKQSPETKLKDEIKDFFKK--- : UniRef90_UPI0004695181
UniRef90_UPI0004725243 : SKHNANDMTCQELLEQDYYDIPVVVGYLWAYNTK-TGTYQVIQVDEMDVVVDDVIEYCQKNPKDKATTAVQKS------ : UniRef90_UPI0004725243
UniRef90_M1K5C8 : ---TPKSMSCQEFIDLNPQTMAPVAFWVLNEDEDFKGGDYVTFDETVTTAVPLTVEICKKHPQSEL-TKIKDEIKK--- : UniRef90_M1K5C8
: 1---------11--------21--------31--------41--------51--------61--------71------- :
OrigSeq : NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK : OrigSeq
Jnet : -------HHHHHHH--------EEEEEEEEE--------EEEEEEE----HHHHHHHHHH-HHHHHHHHHHHHHHH--- : Jnet
jhmm : ------HHHHHHHH--------EEEEEEEEE-------EEEEEEEEE--HHHHHHHHHHH-HHHHHHHHHHHHHHHH-- : jhmm
jpssm : --------HHHHHHH-------EEEEEEE-----------EEEEE------HHHHHHHHH--HHHHHHHHHHHHHH--- : jpssm
Lupas 14 : ------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : -------BBB--BB-B---B-B-BBBBBBBBB------B--B-B-BB--BB--BB--B---B---BB--B--BB--B-- : Jnet_25
Jnet_5 : ---------B--B------B---BBBBB-B-----------------------B---B-------B---B--------- : Jnet_5
Jnet_0 : ---------B--------------BB-B-B-----------------------B-----------B---B--------- : Jnet_0
Jnet Rel : 9999881236666503788873378888531577777712477760377212358888752354899999999874099 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.