SILENT_MODE BLOCK_FILE jp_UQkYMoO.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_UQkYMoO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 104 5 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 6 104 15 H SPACE SUB_CHARS 1 6 104 15 E SPACE SUB_CHARS 1 6 104 15 - SPACE STRAND 44 9 48 COLOUR_TEXT_REGION 44 9 48 9 51 STRAND 53 9 57 COLOUR_TEXT_REGION 53 9 57 9 51 STRAND 61 9 64 COLOUR_TEXT_REGION 61 9 64 9 51 STRAND 91 9 92 COLOUR_TEXT_REGION 91 9 92 9 51 STRAND 98 9 102 COLOUR_TEXT_REGION 98 9 102 9 51 HELIX 3 9 11 COLOUR_TEXT_REGION 3 9 11 9 50 HELIX 17 9 39 COLOUR_TEXT_REGION 17 9 39 9 50 HELIX 70 9 78 COLOUR_TEXT_REGION 70 9 78 9 50 HELIX 84 9 90 COLOUR_TEXT_REGION 84 9 90 9 50 STRAND 19 14 21 COLOUR_TEXT_REGION 19 14 21 14 51 STRAND 44 14 47 COLOUR_TEXT_REGION 44 14 47 14 51 STRAND 53 14 57 COLOUR_TEXT_REGION 53 14 57 14 51 STRAND 61 14 64 COLOUR_TEXT_REGION 61 14 64 14 51 STRAND 98 14 102 COLOUR_TEXT_REGION 98 14 102 14 51 HELIX 3 14 10 COLOUR_TEXT_REGION 3 14 10 14 50 HELIX 17 14 18 COLOUR_TEXT_REGION 17 14 18 14 50 HELIX 22 14 40 COLOUR_TEXT_REGION 22 14 40 14 50 HELIX 70 14 78 COLOUR_TEXT_REGION 70 14 78 14 50 HELIX 84 14 92 COLOUR_TEXT_REGION 84 14 92 14 50 STRAND 43 15 48 COLOUR_TEXT_REGION 43 15 48 15 51 STRAND 53 15 57 COLOUR_TEXT_REGION 53 15 57 15 51 STRAND 60 15 64 COLOUR_TEXT_REGION 60 15 64 15 51 STRAND 86 15 92 COLOUR_TEXT_REGION 86 15 92 15 51 STRAND 98 15 102 COLOUR_TEXT_REGION 98 15 102 15 51 HELIX 4 15 11 COLOUR_TEXT_REGION 4 15 11 15 50 HELIX 18 15 38 COLOUR_TEXT_REGION 18 15 38 15 50 HELIX 70 15 78 COLOUR_TEXT_REGION 70 15 78 15 50