SILENT_MODE BLOCK_FILE jp_lwmm4kn.concise.blc MAX_NSEQ 1026 MAX_INPUT_LEN 1028 OUTPUT_FILE jp_lwmm4kn.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 323 1015 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1016 323 1025 H SPACE SUB_CHARS 1 1016 323 1025 E SPACE SUB_CHARS 1 1016 323 1025 - SPACE STRAND 60 1019 65 COLOUR_TEXT_REGION 60 1019 65 1019 51 STRAND 118 1019 124 COLOUR_TEXT_REGION 118 1019 124 1019 51 STRAND 156 1019 161 COLOUR_TEXT_REGION 156 1019 161 1019 51 STRAND 170 1019 175 COLOUR_TEXT_REGION 170 1019 175 1019 51 STRAND 198 1019 198 COLOUR_TEXT_REGION 198 1019 198 1019 51 STRAND 214 1019 221 COLOUR_TEXT_REGION 214 1019 221 1019 51 STRAND 227 1019 231 COLOUR_TEXT_REGION 227 1019 231 1019 51 STRAND 259 1019 263 COLOUR_TEXT_REGION 259 1019 263 1019 51 STRAND 267 1019 272 COLOUR_TEXT_REGION 267 1019 272 1019 51 STRAND 275 1019 279 COLOUR_TEXT_REGION 275 1019 279 1019 51 STRAND 292 1019 299 COLOUR_TEXT_REGION 292 1019 299 1019 51 STRAND 317 1019 317 COLOUR_TEXT_REGION 317 1019 317 1019 51 HELIX 6 1019 20 COLOUR_TEXT_REGION 6 1019 20 1019 50 HELIX 28 1019 37 COLOUR_TEXT_REGION 28 1019 37 1019 50 HELIX 43 1019 54 COLOUR_TEXT_REGION 43 1019 54 1019 50 HELIX 91 1019 104 COLOUR_TEXT_REGION 91 1019 104 1019 50 HELIX 176 1019 182 COLOUR_TEXT_REGION 176 1019 182 1019 50 HELIX 186 1019 192 COLOUR_TEXT_REGION 186 1019 192 1019 50 HELIX 241 1019 258 COLOUR_TEXT_REGION 241 1019 258 1019 50 STRAND 60 1024 65 COLOUR_TEXT_REGION 60 1024 65 1024 51 STRAND 119 1024 124 COLOUR_TEXT_REGION 119 1024 124 1024 51 STRAND 156 1024 161 COLOUR_TEXT_REGION 156 1024 161 1024 51 STRAND 171 1024 174 COLOUR_TEXT_REGION 171 1024 174 1024 51 STRAND 197 1024 198 COLOUR_TEXT_REGION 197 1024 198 1024 51 STRAND 211 1024 221 COLOUR_TEXT_REGION 211 1024 221 1024 51 STRAND 227 1024 231 COLOUR_TEXT_REGION 227 1024 231 1024 51 STRAND 258 1024 263 COLOUR_TEXT_REGION 258 1024 263 1024 51 STRAND 267 1024 272 COLOUR_TEXT_REGION 267 1024 272 1024 51 STRAND 274 1024 279 COLOUR_TEXT_REGION 274 1024 279 1024 51 STRAND 292 1024 299 COLOUR_TEXT_REGION 292 1024 299 1024 51 HELIX 6 1024 20 COLOUR_TEXT_REGION 6 1024 20 1024 50 HELIX 43 1024 55 COLOUR_TEXT_REGION 43 1024 55 1024 50 HELIX 91 1024 103 COLOUR_TEXT_REGION 91 1024 103 1024 50 HELIX 176 1024 182 COLOUR_TEXT_REGION 176 1024 182 1024 50 HELIX 185 1024 192 COLOUR_TEXT_REGION 185 1024 192 1024 50 HELIX 241 1024 257 COLOUR_TEXT_REGION 241 1024 257 1024 50 STRAND 61 1025 65 COLOUR_TEXT_REGION 61 1025 65 1025 51 STRAND 108 1025 109 COLOUR_TEXT_REGION 108 1025 109 1025 51 STRAND 118 1025 124 COLOUR_TEXT_REGION 118 1025 124 1025 51 STRAND 161 1025 161 COLOUR_TEXT_REGION 161 1025 161 1025 51 STRAND 170 1025 175 COLOUR_TEXT_REGION 170 1025 175 1025 51 STRAND 219 1025 221 COLOUR_TEXT_REGION 219 1025 221 1025 51 STRAND 228 1025 231 COLOUR_TEXT_REGION 228 1025 231 1025 51 STRAND 261 1025 262 COLOUR_TEXT_REGION 261 1025 262 1025 51 STRAND 268 1025 272 COLOUR_TEXT_REGION 268 1025 272 1025 51 STRAND 275 1025 279 COLOUR_TEXT_REGION 275 1025 279 1025 51 STRAND 293 1025 299 COLOUR_TEXT_REGION 293 1025 299 1025 51 STRAND 316 1025 319 COLOUR_TEXT_REGION 316 1025 319 1025 51 HELIX 7 1025 19 COLOUR_TEXT_REGION 7 1025 19 1025 50 HELIX 28 1025 39 COLOUR_TEXT_REGION 28 1025 39 1025 50 HELIX 43 1025 53 COLOUR_TEXT_REGION 43 1025 53 1025 50 HELIX 90 1025 104 COLOUR_TEXT_REGION 90 1025 104 1025 50 HELIX 154 1025 160 COLOUR_TEXT_REGION 154 1025 160 1025 50 HELIX 176 1025 182 COLOUR_TEXT_REGION 176 1025 182 1025 50 HELIX 188 1025 192 COLOUR_TEXT_REGION 188 1025 192 1025 50 HELIX 241 1025 260 COLOUR_TEXT_REGION 241 1025 260 1025 50