QUERY           : DESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYV : QUERY 
UniRef90_P81511 : DESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYV : UniRef90_P81511

                : 1---------11--------21--------31--------41--------51-------- :
OrigSeq         : DESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYV : OrigSeq

Jnet            : ----E------EEEEEE-------------------------EEEEE-------EEE---- : Jnet
jhmm            : ---EE------EEEEEE-------------------------EEEE--------EEE---- : jhmm
jpssm           : ----------HHHHHHH-------------------------EEEEE------EEEEE--- : jpssm

Lupas 14        : ------------------------------------------------------------- : Lupas 14
Lupas 21        : ------------------------------------------------------------- : Lupas 21
Lupas 28        : ------------------------------------------------------------- : Lupas 28

Jnet_25         : ---BBBB-B--BBBBBB-B---B-----B---B-B-BB---BB-BB-B----B--BBB-B- : Jnet_25
Jnet_5          : -----B-----BBBBBB--------------------B-------B------B---B---- : Jnet_5
Jnet_0          : -----B------BB-----------------------B----------------------- : Jnet_0
Jnet Rel        : 9980121563223333304677777777777776666667651688137887416641589 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.