SILENT_MODE BLOCK_FILE jp__J7ubX2.concise.blc MAX_NSEQ 670 MAX_INPUT_LEN 672 OUTPUT_FILE jp__J7ubX2.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 124 659 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 660 124 669 H SPACE SUB_CHARS 1 660 124 669 E SPACE SUB_CHARS 1 660 124 669 - SPACE STRAND 45 663 47 COLOUR_TEXT_REGION 45 663 47 663 51 STRAND 73 663 74 COLOUR_TEXT_REGION 73 663 74 663 51 STRAND 80 663 86 COLOUR_TEXT_REGION 80 663 86 663 51 STRAND 96 663 101 COLOUR_TEXT_REGION 96 663 101 663 51 STRAND 105 663 110 COLOUR_TEXT_REGION 105 663 110 663 51 STRAND 117 663 120 COLOUR_TEXT_REGION 117 663 120 663 51 HELIX 4 663 12 COLOUR_TEXT_REGION 4 663 12 663 50 HELIX 25 663 34 COLOUR_TEXT_REGION 25 663 34 663 50 HELIX 51 663 58 COLOUR_TEXT_REGION 51 663 58 663 50 STRAND 45 668 47 COLOUR_TEXT_REGION 45 668 47 668 51 STRAND 73 668 74 COLOUR_TEXT_REGION 73 668 74 668 51 STRAND 81 668 86 COLOUR_TEXT_REGION 81 668 86 668 51 STRAND 96 668 102 COLOUR_TEXT_REGION 96 668 102 668 51 STRAND 105 668 110 COLOUR_TEXT_REGION 105 668 110 668 51 STRAND 117 668 120 COLOUR_TEXT_REGION 117 668 120 668 51 HELIX 4 668 12 COLOUR_TEXT_REGION 4 668 12 668 50 HELIX 26 668 33 COLOUR_TEXT_REGION 26 668 33 668 50 HELIX 51 668 58 COLOUR_TEXT_REGION 51 668 58 668 50 STRAND 46 669 47 COLOUR_TEXT_REGION 46 669 47 669 51 STRAND 73 669 75 COLOUR_TEXT_REGION 73 669 75 669 51 STRAND 79 669 86 COLOUR_TEXT_REGION 79 669 86 669 51 STRAND 97 669 101 COLOUR_TEXT_REGION 97 669 101 669 51 STRAND 105 669 110 COLOUR_TEXT_REGION 105 669 110 669 51 STRAND 115 669 119 COLOUR_TEXT_REGION 115 669 119 669 51 HELIX 4 669 12 COLOUR_TEXT_REGION 4 669 12 669 50 HELIX 23 669 34 COLOUR_TEXT_REGION 23 669 34 669 50 HELIX 52 669 58 COLOUR_TEXT_REGION 52 669 58 669 50