SILENT_MODE
BLOCK_FILE jp_geybnsb.concise.blc
MAX_NSEQ 60
MAX_INPUT_LEN 62
OUTPUT_FILE jp_geybnsb.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 82 49   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 50 82 59 H SPACE
SUB_CHARS 1 50 82 59 E SPACE
SUB_CHARS 1 50 82 59 - SPACE
STRAND 13 53 15
COLOUR_TEXT_REGION 13 53 15 53 51
STRAND 22 53 27
COLOUR_TEXT_REGION 22 53 27 53 51
STRAND 33 53 38
COLOUR_TEXT_REGION 33 53 38 53 51
STRAND 43 53 47
COLOUR_TEXT_REGION 43 53 47 53 51
STRAND 58 53 62
COLOUR_TEXT_REGION 58 53 62 53 51
STRAND 66 53 71
COLOUR_TEXT_REGION 66 53 71 53 51
STRAND 76 53 80
COLOUR_TEXT_REGION 76 53 80 53 51
STRAND 14 58 15
COLOUR_TEXT_REGION 14 58 15 58 51
STRAND 22 58 27
COLOUR_TEXT_REGION 22 58 27 58 51
STRAND 33 58 38
COLOUR_TEXT_REGION 33 58 38 58 51
STRAND 44 58 47
COLOUR_TEXT_REGION 44 58 47 58 51
STRAND 58 58 62
COLOUR_TEXT_REGION 58 58 62 58 51
STRAND 66 58 71
COLOUR_TEXT_REGION 66 58 71 58 51
STRAND 76 58 80
COLOUR_TEXT_REGION 76 58 80 58 51
STRAND 13 59 16
COLOUR_TEXT_REGION 13 59 16 59 51
STRAND 22 59 27
COLOUR_TEXT_REGION 22 59 27 59 51
STRAND 33 59 38
COLOUR_TEXT_REGION 33 59 38 59 51
STRAND 43 59 47
COLOUR_TEXT_REGION 43 59 47 59 51
STRAND 57 59 62
COLOUR_TEXT_REGION 57 59 62 59 51
STRAND 66 59 71
COLOUR_TEXT_REGION 66 59 71 59 51
STRAND 76 59 80
COLOUR_TEXT_REGION 76 59 80 59 51