SILENT_MODE BLOCK_FILE jp_ZZlAt30.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_ZZlAt30.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 158 35 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 36 158 45 H SPACE SUB_CHARS 1 36 158 45 E SPACE SUB_CHARS 1 36 158 45 - SPACE STRAND 10 39 13 COLOUR_TEXT_REGION 10 39 13 39 51 STRAND 67 39 71 COLOUR_TEXT_REGION 67 39 71 39 51 STRAND 93 39 97 COLOUR_TEXT_REGION 93 39 97 39 51 STRAND 151 39 152 COLOUR_TEXT_REGION 151 39 152 39 51 HELIX 20 39 51 COLOUR_TEXT_REGION 20 39 51 39 50 HELIX 76 39 86 COLOUR_TEXT_REGION 76 39 86 39 50 HELIX 105 39 133 COLOUR_TEXT_REGION 105 39 133 39 50 HELIX 141 39 147 COLOUR_TEXT_REGION 141 39 147 39 50 STRAND 11 44 12 COLOUR_TEXT_REGION 11 44 12 44 51 STRAND 67 44 72 COLOUR_TEXT_REGION 67 44 72 44 51 STRAND 93 44 97 COLOUR_TEXT_REGION 93 44 97 44 51 STRAND 105 44 107 COLOUR_TEXT_REGION 105 44 107 44 51 STRAND 110 44 113 COLOUR_TEXT_REGION 110 44 113 44 51 STRAND 137 44 139 COLOUR_TEXT_REGION 137 44 139 44 51 STRAND 151 44 152 COLOUR_TEXT_REGION 151 44 152 44 51 HELIX 13 44 13 COLOUR_TEXT_REGION 13 44 13 44 50 HELIX 20 44 52 COLOUR_TEXT_REGION 20 44 52 44 50 HELIX 76 44 86 COLOUR_TEXT_REGION 76 44 86 44 50 HELIX 114 44 114 COLOUR_TEXT_REGION 114 44 114 44 50 HELIX 116 44 133 COLOUR_TEXT_REGION 116 44 133 44 50 HELIX 141 44 148 COLOUR_TEXT_REGION 141 44 148 44 50 STRAND 10 45 12 COLOUR_TEXT_REGION 10 45 12 45 51 STRAND 67 45 71 COLOUR_TEXT_REGION 67 45 71 45 51 STRAND 92 45 97 COLOUR_TEXT_REGION 92 45 97 45 51 STRAND 151 45 153 COLOUR_TEXT_REGION 151 45 153 45 51 HELIX 20 45 51 COLOUR_TEXT_REGION 20 45 51 45 50 HELIX 75 45 85 COLOUR_TEXT_REGION 75 45 85 45 50 HELIX 105 45 133 COLOUR_TEXT_REGION 105 45 133 45 50 HELIX 143 45 147 COLOUR_TEXT_REGION 143 45 147 45 50