SILENT_MODE BLOCK_FILE jp_cv3iMNP.concise.blc MAX_NSEQ 717 MAX_INPUT_LEN 719 OUTPUT_FILE jp_cv3iMNP.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 612 706 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 707 612 716 H SPACE SUB_CHARS 1 707 612 716 E SPACE SUB_CHARS 1 707 612 716 - SPACE STRAND 12 710 19 COLOUR_TEXT_REGION 12 710 19 710 51 STRAND 22 710 27 COLOUR_TEXT_REGION 22 710 27 710 51 STRAND 78 710 81 COLOUR_TEXT_REGION 78 710 81 710 51 STRAND 105 710 109 COLOUR_TEXT_REGION 105 710 109 710 51 STRAND 178 710 182 COLOUR_TEXT_REGION 178 710 182 710 51 STRAND 213 710 218 COLOUR_TEXT_REGION 213 710 218 710 51 STRAND 314 710 318 COLOUR_TEXT_REGION 314 710 318 710 51 STRAND 413 710 418 COLOUR_TEXT_REGION 413 710 418 710 51 STRAND 443 710 444 COLOUR_TEXT_REGION 443 710 444 710 51 STRAND 459 710 459 COLOUR_TEXT_REGION 459 710 459 710 51 STRAND 472 710 473 COLOUR_TEXT_REGION 472 710 473 710 51 STRAND 481 710 484 COLOUR_TEXT_REGION 481 710 484 710 51 STRAND 586 710 591 COLOUR_TEXT_REGION 586 710 591 710 51 HELIX 83 710 99 COLOUR_TEXT_REGION 83 710 99 710 50 HELIX 118 710 130 COLOUR_TEXT_REGION 118 710 130 710 50 HELIX 169 710 173 COLOUR_TEXT_REGION 169 710 173 710 50 HELIX 199 710 208 COLOUR_TEXT_REGION 199 710 208 710 50 HELIX 240 710 253 COLOUR_TEXT_REGION 240 710 253 710 50 HELIX 260 710 266 COLOUR_TEXT_REGION 260 710 266 710 50 HELIX 270 710 277 COLOUR_TEXT_REGION 270 710 277 710 50 HELIX 289 710 308 COLOUR_TEXT_REGION 289 710 308 710 50 HELIX 328 710 341 COLOUR_TEXT_REGION 328 710 341 710 50 HELIX 400 710 407 COLOUR_TEXT_REGION 400 710 407 710 50 HELIX 423 710 425 COLOUR_TEXT_REGION 423 710 425 710 50 HELIX 429 710 437 COLOUR_TEXT_REGION 429 710 437 710 50 HELIX 498 710 509 COLOUR_TEXT_REGION 498 710 509 710 50 HELIX 521 710 532 COLOUR_TEXT_REGION 521 710 532 710 50 HELIX 547 710 549 COLOUR_TEXT_REGION 547 710 549 710 50 STRAND 13 715 19 COLOUR_TEXT_REGION 13 715 19 715 51 STRAND 22 715 27 COLOUR_TEXT_REGION 22 715 27 715 51 STRAND 38 715 39 COLOUR_TEXT_REGION 38 715 39 715 51 STRAND 78 715 81 COLOUR_TEXT_REGION 78 715 81 715 51 STRAND 105 715 110 COLOUR_TEXT_REGION 105 715 110 715 51 STRAND 177 715 182 COLOUR_TEXT_REGION 177 715 182 715 51 STRAND 214 715 217 COLOUR_TEXT_REGION 214 715 217 715 51 STRAND 232 715 233 COLOUR_TEXT_REGION 232 715 233 715 51 STRAND 314 715 318 COLOUR_TEXT_REGION 314 715 318 715 51 STRAND 412 715 418 COLOUR_TEXT_REGION 412 715 418 715 51 STRAND 442 715 445 COLOUR_TEXT_REGION 442 715 445 715 51 STRAND 472 715 473 COLOUR_TEXT_REGION 472 715 473 715 51 STRAND 481 715 484 COLOUR_TEXT_REGION 481 715 484 715 51 STRAND 555 715 556 COLOUR_TEXT_REGION 555 715 556 715 51 STRAND 586 715 591 COLOUR_TEXT_REGION 586 715 591 715 51 HELIX 55 715 57 COLOUR_TEXT_REGION 55 715 57 715 50 HELIX 83 715 99 COLOUR_TEXT_REGION 83 715 99 715 50 HELIX 118 715 129 COLOUR_TEXT_REGION 118 715 129 715 50 HELIX 153 715 153 COLOUR_TEXT_REGION 153 715 153 715 50 HELIX 155 715 156 COLOUR_TEXT_REGION 155 715 156 715 50 HELIX 199 715 209 COLOUR_TEXT_REGION 199 715 209 715 50 HELIX 224 715 228 COLOUR_TEXT_REGION 224 715 228 715 50 HELIX 240 715 253 COLOUR_TEXT_REGION 240 715 253 715 50 HELIX 259 715 266 COLOUR_TEXT_REGION 259 715 266 715 50 HELIX 269 715 277 COLOUR_TEXT_REGION 269 715 277 715 50 HELIX 296 715 308 COLOUR_TEXT_REGION 296 715 308 715 50 HELIX 328 715 341 COLOUR_TEXT_REGION 328 715 341 715 50 HELIX 400 715 405 COLOUR_TEXT_REGION 400 715 405 715 50 HELIX 424 715 425 COLOUR_TEXT_REGION 424 715 425 715 50 HELIX 429 715 437 COLOUR_TEXT_REGION 429 715 437 715 50 HELIX 453 715 455 COLOUR_TEXT_REGION 453 715 455 715 50 HELIX 498 715 509 COLOUR_TEXT_REGION 498 715 509 715 50 HELIX 521 715 532 COLOUR_TEXT_REGION 521 715 532 715 50 HELIX 546 715 551 COLOUR_TEXT_REGION 546 715 551 715 50 STRAND 4 716 5 COLOUR_TEXT_REGION 4 716 5 716 51 STRAND 12 716 18 COLOUR_TEXT_REGION 12 716 18 716 51 STRAND 22 716 27 COLOUR_TEXT_REGION 22 716 27 716 51 STRAND 41 716 45 COLOUR_TEXT_REGION 41 716 45 716 51 STRAND 78 716 80 COLOUR_TEXT_REGION 78 716 80 716 51 STRAND 105 716 109 COLOUR_TEXT_REGION 105 716 109 716 51 STRAND 179 716 182 COLOUR_TEXT_REGION 179 716 182 716 51 STRAND 213 716 219 COLOUR_TEXT_REGION 213 716 219 716 51 STRAND 314 716 318 COLOUR_TEXT_REGION 314 716 318 716 51 STRAND 413 716 417 COLOUR_TEXT_REGION 413 716 417 716 51 STRAND 458 716 460 COLOUR_TEXT_REGION 458 716 460 716 51 STRAND 472 716 473 COLOUR_TEXT_REGION 472 716 473 716 51 STRAND 586 716 591 COLOUR_TEXT_REGION 586 716 591 716 51 HELIX 53 716 53 COLOUR_TEXT_REGION 53 716 53 716 50 HELIX 83 716 91 COLOUR_TEXT_REGION 83 716 91 716 50 HELIX 95 716 100 COLOUR_TEXT_REGION 95 716 100 716 50 HELIX 120 716 130 COLOUR_TEXT_REGION 120 716 130 716 50 HELIX 169 716 175 COLOUR_TEXT_REGION 169 716 175 716 50 HELIX 199 716 208 COLOUR_TEXT_REGION 199 716 208 716 50 HELIX 240 716 254 COLOUR_TEXT_REGION 240 716 254 716 50 HELIX 262 716 263 COLOUR_TEXT_REGION 262 716 263 716 50 HELIX 271 716 277 COLOUR_TEXT_REGION 271 716 277 716 50 HELIX 287 716 309 COLOUR_TEXT_REGION 287 716 309 716 50 HELIX 329 716 341 COLOUR_TEXT_REGION 329 716 341 716 50 HELIX 384 716 385 COLOUR_TEXT_REGION 384 716 385 716 50 HELIX 400 716 408 COLOUR_TEXT_REGION 400 716 408 716 50 HELIX 423 716 425 COLOUR_TEXT_REGION 423 716 425 716 50 HELIX 430 716 437 COLOUR_TEXT_REGION 430 716 437 716 50 HELIX 481 716 487 COLOUR_TEXT_REGION 481 716 487 716 50 HELIX 498 716 509 COLOUR_TEXT_REGION 498 716 509 716 50 HELIX 521 716 533 COLOUR_TEXT_REGION 521 716 533 716 50