SILENT_MODE BLOCK_FILE jp_r7VTjTZ.concise.blc MAX_NSEQ 420 MAX_INPUT_LEN 422 OUTPUT_FILE jp_r7VTjTZ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 112 409 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 410 112 419 H SPACE SUB_CHARS 1 410 112 419 E SPACE SUB_CHARS 1 410 112 419 - SPACE STRAND 3 413 9 COLOUR_TEXT_REGION 3 413 9 413 51 STRAND 18 413 26 COLOUR_TEXT_REGION 18 413 26 413 51 STRAND 32 413 45 COLOUR_TEXT_REGION 32 413 45 413 51 STRAND 52 413 62 COLOUR_TEXT_REGION 52 413 62 413 51 STRAND 68 413 75 COLOUR_TEXT_REGION 68 413 75 413 51 STRAND 89 413 97 COLOUR_TEXT_REGION 89 413 97 413 51 STRAND 102 413 110 COLOUR_TEXT_REGION 102 413 110 413 51 STRAND 3 418 9 COLOUR_TEXT_REGION 3 418 9 418 51 STRAND 18 418 26 COLOUR_TEXT_REGION 18 418 26 418 51 STRAND 32 418 45 COLOUR_TEXT_REGION 32 418 45 418 51 STRAND 52 418 62 COLOUR_TEXT_REGION 52 418 62 418 51 STRAND 68 418 74 COLOUR_TEXT_REGION 68 418 74 418 51 STRAND 89 418 97 COLOUR_TEXT_REGION 89 418 97 418 51 STRAND 102 418 110 COLOUR_TEXT_REGION 102 418 110 418 51 STRAND 3 419 9 COLOUR_TEXT_REGION 3 419 9 419 51 STRAND 18 419 26 COLOUR_TEXT_REGION 18 419 26 419 51 STRAND 32 419 44 COLOUR_TEXT_REGION 32 419 44 419 51 STRAND 57 419 62 COLOUR_TEXT_REGION 57 419 62 419 51 STRAND 68 419 76 COLOUR_TEXT_REGION 68 419 76 419 51 STRAND 88 419 97 COLOUR_TEXT_REGION 88 419 97 419 51 STRAND 102 419 111 COLOUR_TEXT_REGION 102 419 111 419 51