Jpred secondary structure prediction results

QUERY           : SPGHKTQPFLHDGYAVSWNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVLLPTIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFHRSSSEKIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS : QUERY 
UniRef90_K6UNZ7 : ------RPAVSLGLRAGWKTEEDAKLHIGSYGMKFQRIVLSAEEKEIPFVRAAVAVDSKFLKINGPRSFVVQNGIKTPMACFETEGNLAFCRPSRPIFLSSSSPATLHLSYVTNEHE---NGTIKNPTVDILGQRIVENKVITANKVSLVYKVDS : UniRef90_K6UNZ7

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-- :
OrigSeq         : SPGHKTQPFLHDGYAVSWNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVLLPTIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFHRSSSEKIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS : OrigSeq

Jnet            : ------HHHHHHHHH---------EEEEE-------EEEEEE------EEEEEE------EE-----EEEEE---EEEEEEEE----EEEE-----EEE------EEEEEEEE---------------EEEEEHEEEE--EE----EEEEEEE-- : Jnet
jhmm            : -------HHHHHHH----------EEEEE-------EEEEEE------EEEEEE------EE-----EEEEE---EEEEEEEE-----EE------EEE-------EEEEEEE----EE---------EEEEEEEEEE--EEE---EEEEEEE-- : jhmm
jpssm           : ------HHHHHHHHHH------HHEEEE--------EEEEEE-----EEEEEE------EEEE----EEEEE--EEEEEEEEE----EEEE-----EEE------EEEEEEEE----------------HHHHHHHHHHHHHH---EEEEEEE-- : jpssm

Lupas 14        : ----------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : ----------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28        : ----------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : -------BBBBBBB-BBB-----B-B-BBB-B--B--B-B-B----BBBBBBBBBBB---B-B----BBBB--B--B-B-B----B-B-BB-B--BBBBB----BBBBBBBB------B----B---BB-BBBB--B---B-B---BBBBB-B-- : Jnet_25
Jnet_5          : ---------B-----------------B---------B--------B-BB-B-B---------------B----------B------B--B-----B-B-------B-B-------------------B-BBB-------------B-B------ : Jnet_5
Jnet_0          : ---------B---------------------------------------B--B---------------------------B-------------------------B------------------------------------------------ : Jnet_0
Jnet Rel        : 99987228888677235887534122332436787358887158874143210167885055057862788635177578873178428823787367626888418898885366611677656775021110111001010686489998379 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.