SILENT_MODE BLOCK_FILE jp_gGxbFLb.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_gGxbFLb.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 162 20 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 21 162 30 H SPACE SUB_CHARS 1 21 162 30 E SPACE SUB_CHARS 1 21 162 30 - SPACE STRAND 10 24 14 COLOUR_TEXT_REGION 10 24 14 24 51 STRAND 51 24 54 COLOUR_TEXT_REGION 51 24 54 24 51 STRAND 63 24 71 COLOUR_TEXT_REGION 63 24 71 24 51 STRAND 76 24 82 COLOUR_TEXT_REGION 76 24 82 24 51 STRAND 155 24 160 COLOUR_TEXT_REGION 155 24 160 24 51 HELIX 17 24 33 COLOUR_TEXT_REGION 17 24 33 24 50 HELIX 41 24 46 COLOUR_TEXT_REGION 41 24 46 24 50 HELIX 50 24 50 COLOUR_TEXT_REGION 50 24 50 24 50 HELIX 89 24 99 COLOUR_TEXT_REGION 89 24 99 24 50 HELIX 102 24 106 COLOUR_TEXT_REGION 102 24 106 24 50 HELIX 115 24 143 COLOUR_TEXT_REGION 115 24 143 24 50 STRAND 10 29 14 COLOUR_TEXT_REGION 10 29 14 29 51 STRAND 50 29 55 COLOUR_TEXT_REGION 50 29 55 29 51 STRAND 69 29 71 COLOUR_TEXT_REGION 69 29 71 29 51 STRAND 77 29 82 COLOUR_TEXT_REGION 77 29 82 29 51 STRAND 115 29 116 COLOUR_TEXT_REGION 115 29 116 29 51 STRAND 156 29 160 COLOUR_TEXT_REGION 156 29 160 29 51 HELIX 17 29 33 COLOUR_TEXT_REGION 17 29 33 29 50 HELIX 42 29 46 COLOUR_TEXT_REGION 42 29 46 29 50 HELIX 63 29 68 COLOUR_TEXT_REGION 63 29 68 29 50 HELIX 89 29 99 COLOUR_TEXT_REGION 89 29 99 29 50 HELIX 102 29 106 COLOUR_TEXT_REGION 102 29 106 29 50 HELIX 120 29 143 COLOUR_TEXT_REGION 120 29 143 29 50 STRAND 10 30 14 COLOUR_TEXT_REGION 10 30 14 30 51 STRAND 53 30 54 COLOUR_TEXT_REGION 53 30 54 30 51 STRAND 62 30 71 COLOUR_TEXT_REGION 62 30 71 30 51 STRAND 76 30 81 COLOUR_TEXT_REGION 76 30 81 30 51 STRAND 104 30 106 COLOUR_TEXT_REGION 104 30 106 30 51 STRAND 154 30 159 COLOUR_TEXT_REGION 154 30 159 30 51 HELIX 18 30 33 COLOUR_TEXT_REGION 18 30 33 30 50 HELIX 38 30 45 COLOUR_TEXT_REGION 38 30 45 30 50 HELIX 49 30 52 COLOUR_TEXT_REGION 49 30 52 30 50 HELIX 91 30 98 COLOUR_TEXT_REGION 91 30 98 30 50 HELIX 102 30 103 COLOUR_TEXT_REGION 102 30 103 30 50 HELIX 115 30 143 COLOUR_TEXT_REGION 115 30 143 30 50