Jpred secondary structure prediction results

QUERY                  : AEDGPQKQQLEMPLVLDQDLTQQMRLRVESLKQRGEKKQDGEKLIRPAESVYRLDFIQQQKLQFDHWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFNQL : QUERY 
UniRef90_UPI0003C2725A : ---AADASELELPFVLDEQLTKCMRLRVQSLQQRNERPQDGEKLLRLHEYVYRVDFVRQRNLRFLRWRVRLGKPGKVTVAGISQHWTPDLTNLMTRQLLEPAGIFWKKPGGKEVEYNEADAQEFGERLNELAKIRKVMYFLLAFADGLEPAHLKCSIVFK-- : UniRef90_UPI0003C2725A
UniRef90_B7ZQS0        : ---ASETSEMELPFIEDTQLTKCMRIRVQTLQQKNAKPQEGEMLLRANEYVYRVDF-SKQKLRFLWWKVHLKSPGKVMITGTSQHWTPDLTNLMTRQLLEPSAVFYKKDANDEVECNEADAQEFGERIAELAKIRKVMYFVITFLDGADPATIECSIGFR-- : UniRef90_B7ZQS0
UniRef90_UPI0004419B9C : AEDEPKPTQLDVPLVLDEDLTKQMRLRVESLKHQG-TLQDGEKLLQPVEPMYRVGFSQQQRLRFERRDVVLDKPGKVTITGTSQIWTPDLTNLMTRQLLDPAAIFWRKEDSEAMDWNEADALEFGERLSELAKIRKVVYXLITFSEGVEPADLKASVVFSQL : UniRef90_UPI0004419B9C
UniRef90_H3ANM5        : -----DSSELELAFTQDVQLTEYMRLRAQSLQQRNAKPQDGEKLLQPNEFVYRLDFL-QQKLKFLRWNICLEKPGKIVITATSQHWTPDLTNLMTRQLLEPEGIFWQEENKKEIFNHEADVQEFGERIAELAKIRKAMYFLIAFKDGTEPANVKCSIVFKQI : UniRef90_H3ANM5
UniRef90_V8N5D1        : ---SSEAAELEMPLVQDAELTKLMRIRVKTLEQKKEKPQDGEKVLRPNEFVYRLDFSRQHGLRFLSWKVALDQPGKATIIGTSQHWTPDLTNLMRRQLLDPVGTFWKKLDADVVDCNEADALEFGERLVELAKIRKVMYFLVAFTDGLEPAHLKCSVMF--- : UniRef90_V8N5D1
UniRef90_W5NNW1        : ------ASQLELTFRQDAQLTEVMRLRVKSLQQRNQRPQDGEKLLQPQEVVYRLDF-SQQNLRFLRWNVKLSAPGKITITGTSQLWTPDLTNLMTRQLLEPAGIFWQKPGEDKVQCFEADAQEFGERIAELAKIRKVMYFLLTFEDGMSPADMNCSISFR-- : UniRef90_W5NNW1
UniRef90_I3L065        : ------SKEVKLPFRLDVELTEVMRLRVQSLQQRGQKRQEGERLLQSNEAVYRLDF-SNQSLQFSHWKVWLAQPGHLTIMGTSQLWTPDLTNLMTRQLLEPAGVFWRAADDVPVQCYEADADEFGERIAELAKVRKVMYFLFAFSEGCSPETVDCSITF--- : UniRef90_I3L065
UniRef90_H2SQJ1        : ---SPQWQHIDIACLSVSEILKMMRLRVSSLQRSGQKRQDGERLLLPHEAVYRLDF-PTQKLKFSRWYFSLGGYGRVTITGICQLWTPDLTHLMTRQLLEPIGTFWRNADDSPLKWLEADMQEFGERIAELAKVRKVMYFLFAFKDGAEAANLSCSVDFT-- : UniRef90_H2SQJ1
UniRef90_Q8QGH5        : ---------LELTFNPDVQLTEMMRLRVQSLQQRGQKRQDGERLLKSNEHVYSLDF-SEQALHFTRWNIRISSPGRLNIIATSQLWTPDLTHLMTRQLLEPTGLFWRSADDENIQCYEADAQEFGERIAELAKVRKVMYFLFAFEDGLSPESVECSIEF--- : UniRef90_Q8QGH5
UniRef90_G3QC70        : --------ELELTFRPDTHLTEVMRLRVQSLQQRGQGRQDGERLLRPNEAVYRLDFPRQ-ALSFSRWSAGPVQTGRLTITATSQLWTPDLTNLMTRQLLEPVAVFWRSPGDSAVRCYEADAHELGERIAESARVRKVMYFLFAFADGCGPQAVDCSITFT-- : UniRef90_G3QC70
UniRef90_F1QDG2        : -------SEMELTFTEDLQLTEVMRLRVQSLQQKGQKRQDGERLLLPHESVYRLDF-SDQDLSFTRWNVSLQGTGRFTVTGICQLWTPDLTHLMTRQLLEPIGQFWRNPEDSPIKCLEADIQEFGERIAELARVRKVMYFLIAFKEGATKEKISCSLTFCK- : UniRef90_F1QDG2
UniRef90_G3PIY6        : --DGATAPSNTLVLVEDHALTEMMRLRVSSLQRLGQKRQEGERLLLPHEAIYRLDF-PNQELSFSRWYFSLAAHGRVTITGISQHWTPDLTHLMTRQLLEPIGTFWRSPEDSPLKWLEADMQEFGERIAELAKVRKVMYFLLAFKDGAEAANLSCSVEFT-- : UniRef90_G3PIY6
UniRef90_UPI00035A1A0D : ---AAEAGLLELPLTRDEQLTRRMRLRFQSLQQRGGRPQDGEKLLHPNEHIYRLEFSQQHQLRFLRWRLRLGAPGTVAVTGTSQHWTPDLTHLMRRQLLEPVGIFWRRLGAEEVECNEADAQEFGERIAELARIRKVMYFLLTFTGGLEPAQLKGSIVFR-- : UniRef90_UPI00035A1A0D
UniRef90_UPI00042BC8A6 : -------------------------------------------LLRPAESVYRLDFIQQQKLQFERWDVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWHKEDSDTMDWNEADALEFGERLSDLAKIRKVMYFLIAFSEGLEPANLKASVVFNQL : UniRef90_UPI00042BC8A6
UniRef90_A4F2G0        : ------PSQLSMPLVLDRDLTKQMRLRVESLKQRGQKRQDGEKLLRPAESVYRIDFIQQHRLQFERWDVVLDQPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWRKEDSEAMDWNEADALEFGERLSDLAKIRKV------------------------- : UniRef90_A4F2G0
UniRef90_W5LUV6        : -------------------------------------------------------------LTIIQCNLLLQGLGRLSVTGISQLWTPDLTNLMTRQLLEPTGQFWRSPEDAPLKCLEADIQEFGERIAELAKVRKVMYFLFAFKDGAEKDNIKCSLMFKK- : UniRef90_W5LUV6

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------16 :
OrigSeq                : AEDGPQKQQLEMPLVLDQDLTQQMRLRVESLKQRGEKKQDGEKLIRPAESVYRLDFIQQQKLQFDHWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFNQL : OrigSeq

Jnet                   : ---------EEEEE--HHHHHHHHHHHHHHHHH-------HHHHHH---HEEEE--------EEEEEEEEE----EEEEEEE------HHHHHHHHHHH--HHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------EEEEEE-- : Jnet
jhmm                   : ---------EEEEE--HHHHHHHHHHHHHHHHH--------HHHHH---EEEEEE-------HHHHHHEEE-----EEEEEE------HHHHHHHHHHH--HHHHH--------EE---HHHHHHHHHHHHHHHHHHHHHHHH------------EEEEE-- : jhmm
jpssm                  : ---------EEEEE---HHHHHHHHHHHHHHHH----HHHHHHHH---HHHHEE-------EEEEEEEEEE----EEEEEE---------HHHHHHHH---HHEEE--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------EEEEEE--- : jpssm

Lupas 14               : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21               : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28               : ------------------------------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 28

Jnet_25                : ---------B-B-BB----BB-BB-BBB--B---------B--BB----BBB-B-BB----B-B--B-B-B---B-BBBBBBB--BB--BB-BB---BB-BBB-BB-------B-BB-B-B--BB--B--BB-BB-BBBBBBBB---B----B-B-B-B--- : Jnet_25
Jnet_5                 : -----------B-------B---B---B-------------------------B--------------B-B-----B-B-B--------B---B---------------------------------B-----B--BB-BBB-B----------B-B-B--- : Jnet_5
Jnet_0                 : ------------------------------------------------------------------------------B------------------------------------------------B------------B--------------------- : Jnet_0
Jnet Rel               : 898877776057750627899999999999874378642026643143312301077645312233349965885089984077777714256887751511243257888764010449999999999999888777642210577776651118986289 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.