SILENT_MODE BLOCK_FILE jp_nGS2Yif.concise.blc MAX_NSEQ 934 MAX_INPUT_LEN 936 OUTPUT_FILE jp_nGS2Yif.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 233 923 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 924 233 933 H SPACE SUB_CHARS 1 924 233 933 E SPACE SUB_CHARS 1 924 233 933 - SPACE STRAND 22 927 24 COLOUR_TEXT_REGION 22 927 24 927 51 STRAND 48 927 48 COLOUR_TEXT_REGION 48 927 48 927 51 STRAND 76 927 80 COLOUR_TEXT_REGION 76 927 80 927 51 STRAND 111 927 119 COLOUR_TEXT_REGION 111 927 119 927 51 STRAND 130 927 133 COLOUR_TEXT_REGION 130 927 133 927 51 STRAND 144 927 152 COLOUR_TEXT_REGION 144 927 152 927 51 STRAND 172 927 180 COLOUR_TEXT_REGION 172 927 180 927 51 STRAND 192 927 197 COLOUR_TEXT_REGION 192 927 197 927 51 STRAND 201 927 206 COLOUR_TEXT_REGION 201 927 206 927 51 STRAND 220 927 223 COLOUR_TEXT_REGION 220 927 223 927 51 HELIX 52 927 69 COLOUR_TEXT_REGION 52 927 69 927 50 HELIX 85 927 99 COLOUR_TEXT_REGION 85 927 99 927 50 HELIX 155 927 167 COLOUR_TEXT_REGION 155 927 167 927 50 HELIX 225 927 231 COLOUR_TEXT_REGION 225 927 231 927 50 STRAND 22 932 24 COLOUR_TEXT_REGION 22 932 24 932 51 STRAND 48 932 49 COLOUR_TEXT_REGION 48 932 49 932 51 STRAND 76 932 80 COLOUR_TEXT_REGION 76 932 80 932 51 STRAND 111 932 119 COLOUR_TEXT_REGION 111 932 119 932 51 STRAND 130 932 133 COLOUR_TEXT_REGION 130 932 133 932 51 STRAND 144 932 152 COLOUR_TEXT_REGION 144 932 152 932 51 STRAND 173 932 180 COLOUR_TEXT_REGION 173 932 180 932 51 STRAND 192 932 197 COLOUR_TEXT_REGION 192 932 197 932 51 STRAND 201 932 206 COLOUR_TEXT_REGION 201 932 206 932 51 STRAND 221 932 223 COLOUR_TEXT_REGION 221 932 223 932 51 HELIX 52 932 69 COLOUR_TEXT_REGION 52 932 69 932 50 HELIX 85 932 98 COLOUR_TEXT_REGION 85 932 98 932 50 HELIX 155 932 167 COLOUR_TEXT_REGION 155 932 167 932 50 HELIX 225 932 231 COLOUR_TEXT_REGION 225 932 231 932 50 STRAND 22 933 24 COLOUR_TEXT_REGION 22 933 24 933 51 STRAND 76 933 81 COLOUR_TEXT_REGION 76 933 81 933 51 STRAND 111 933 115 COLOUR_TEXT_REGION 111 933 115 933 51 STRAND 131 933 132 COLOUR_TEXT_REGION 131 933 132 933 51 STRAND 144 933 151 COLOUR_TEXT_REGION 144 933 151 933 51 STRAND 172 933 180 COLOUR_TEXT_REGION 172 933 180 933 51 STRAND 192 933 197 COLOUR_TEXT_REGION 192 933 197 933 51 STRAND 201 933 206 COLOUR_TEXT_REGION 201 933 206 933 51 STRAND 220 933 223 COLOUR_TEXT_REGION 220 933 223 933 51 HELIX 43 933 48 COLOUR_TEXT_REGION 43 933 48 933 50 HELIX 52 933 70 COLOUR_TEXT_REGION 52 933 70 933 50 HELIX 85 933 100 COLOUR_TEXT_REGION 85 933 100 933 50 HELIX 116 933 118 COLOUR_TEXT_REGION 116 933 118 933 50 HELIX 152 933 152 COLOUR_TEXT_REGION 152 933 152 933 50 HELIX 155 933 167 COLOUR_TEXT_REGION 155 933 167 933 50 HELIX 225 933 231 COLOUR_TEXT_REGION 225 933 231 933 50