SILENT_MODE BLOCK_FILE jp_U3PmiCD.concise.blc MAX_NSEQ 806 MAX_INPUT_LEN 808 OUTPUT_FILE jp_U3PmiCD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 235 795 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 796 235 805 H SPACE SUB_CHARS 1 796 235 805 E SPACE SUB_CHARS 1 796 235 805 - SPACE STRAND 13 799 19 COLOUR_TEXT_REGION 13 799 19 799 51 STRAND 55 799 58 COLOUR_TEXT_REGION 55 799 58 799 51 STRAND 63 799 68 COLOUR_TEXT_REGION 63 799 68 799 51 STRAND 132 799 137 COLOUR_TEXT_REGION 132 799 137 799 51 STRAND 141 799 146 COLOUR_TEXT_REGION 141 799 146 799 51 STRAND 155 799 156 COLOUR_TEXT_REGION 155 799 156 799 51 STRAND 176 799 178 COLOUR_TEXT_REGION 176 799 178 799 51 STRAND 195 799 198 COLOUR_TEXT_REGION 195 799 198 799 51 STRAND 202 799 205 COLOUR_TEXT_REGION 202 799 205 799 51 STRAND 211 799 217 COLOUR_TEXT_REGION 211 799 217 799 51 HELIX 24 799 28 COLOUR_TEXT_REGION 24 799 28 799 50 HELIX 31 799 51 COLOUR_TEXT_REGION 31 799 51 799 50 HELIX 75 799 125 COLOUR_TEXT_REGION 75 799 125 799 50 HELIX 161 799 169 COLOUR_TEXT_REGION 161 799 169 799 50 HELIX 180 799 188 COLOUR_TEXT_REGION 180 799 188 799 50 STRAND 13 804 19 COLOUR_TEXT_REGION 13 804 19 804 51 STRAND 55 804 59 COLOUR_TEXT_REGION 55 804 59 804 51 STRAND 63 804 68 COLOUR_TEXT_REGION 63 804 68 804 51 STRAND 132 804 138 COLOUR_TEXT_REGION 132 804 138 804 51 STRAND 140 804 146 COLOUR_TEXT_REGION 140 804 146 804 51 STRAND 154 804 158 COLOUR_TEXT_REGION 154 804 158 804 51 STRAND 176 804 178 COLOUR_TEXT_REGION 176 804 178 804 51 STRAND 195 804 198 COLOUR_TEXT_REGION 195 804 198 804 51 STRAND 202 804 204 COLOUR_TEXT_REGION 202 804 204 804 51 STRAND 211 804 216 COLOUR_TEXT_REGION 211 804 216 804 51 HELIX 24 804 28 COLOUR_TEXT_REGION 24 804 28 804 50 HELIX 31 804 51 COLOUR_TEXT_REGION 31 804 51 804 50 HELIX 77 804 124 COLOUR_TEXT_REGION 77 804 124 804 50 HELIX 161 804 169 COLOUR_TEXT_REGION 161 804 169 804 50 HELIX 180 804 187 COLOUR_TEXT_REGION 180 804 187 804 50 STRAND 13 805 19 COLOUR_TEXT_REGION 13 805 19 805 51 STRAND 51 805 51 COLOUR_TEXT_REGION 51 805 51 805 51 STRAND 55 805 58 COLOUR_TEXT_REGION 55 805 58 805 51 STRAND 63 805 68 COLOUR_TEXT_REGION 63 805 68 805 51 STRAND 132 805 136 COLOUR_TEXT_REGION 132 805 136 805 51 STRAND 142 805 146 COLOUR_TEXT_REGION 142 805 146 805 51 STRAND 176 805 177 COLOUR_TEXT_REGION 176 805 177 805 51 STRAND 194 805 198 COLOUR_TEXT_REGION 194 805 198 805 51 STRAND 202 805 205 COLOUR_TEXT_REGION 202 805 205 805 51 STRAND 211 805 217 COLOUR_TEXT_REGION 211 805 217 805 51 HELIX 24 805 28 COLOUR_TEXT_REGION 24 805 28 805 50 HELIX 31 805 45 COLOUR_TEXT_REGION 31 805 45 805 50 HELIX 48 805 50 COLOUR_TEXT_REGION 48 805 50 805 50 HELIX 74 805 88 COLOUR_TEXT_REGION 74 805 88 805 50 HELIX 93 805 103 COLOUR_TEXT_REGION 93 805 103 805 50 HELIX 111 805 119 COLOUR_TEXT_REGION 111 805 119 805 50 HELIX 122 805 125 COLOUR_TEXT_REGION 122 805 125 805 50 HELIX 162 805 169 COLOUR_TEXT_REGION 162 805 169 805 50 HELIX 180 805 188 COLOUR_TEXT_REGION 180 805 188 805 50